RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CD69Q07108 199 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ATP6V1FQ16864 119 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 VWC2Q2TAL6 325 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ETFRF1Q6IPR1 90 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ZNF343Q6P1L6 599 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ETV3LQ6ZN32 361 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ACOT7LQ6ZUV0 252 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR10P1Q8NGE3 313 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 HYLS1Q96M11 299 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 FNDC4Q9H6D8 234 aaPredicted RBP8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 RPS10-NUDT3A0A1W2PQS6 291 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 IGSF23A1L1A6 192 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 RNF222A6NCQ9 220 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 NDUFB8O95169 186 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 PRH1P02810 166 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TRGV3P03979 118 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 IFNA4P05014 189 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR8U8P0C7N1 319 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 DLK1P80370 383 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 RHOGP84095 191 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 EWSR1Q01844 656 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 NHLH2Q02577 135 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ARL16Q0P5N6 197 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ZNF345Q14585 488 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 C19orf35Q6ZS72 473 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 HAPLN4Q86UW8 402 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR4X2Q8NGF9 303 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR4X1Q8NH49 305 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 SCARB1Q8WTV0 552 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 DCUN1D4Q92564 292 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 PINX1Q96BK5 328 aaKnown RBP8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 PPP1R14BQ96C90 147 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CITED1Q99966 193 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 FBXL7Q9UJT9 491 aa8.62□□□□□ -1.03
CDK5RAP3-204ENST00000577664 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 H3BP45 60 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MT-CO2P00403 227 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 PF4V1P10720 104 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CAV2P51636 162 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 KRTAP10-3P60369 221 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 HBG1P69891 147 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 HBG2P69892 147 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ATP5G2Q06055 141 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CD300CQ08708 224 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR2F1Q13607 317 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 GAMTQ14353 236 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MLANAQ16655 118 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 C15orf32Q32M92 178 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 STX12Q86Y82 276 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 INO80EQ8NBZ0 244 aaPredicted RBP8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ZNF502Q8TBZ5 544 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 GAR1Q9NY12 217 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 HSPB11Q9Y547 144 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 DNAH3Q8TD57 4116 aa8.61□□□□□ -1.03
CDK5RAP3-204ENST00000577664 A0A0D9SG52 128 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 SMLR1H3BR10 107 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 I3L521 148 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR2J3O76001 311 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 RPLP1P05386 114 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MFAP4P55083 255 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TPPP2P59282 170 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TMEM144Q7Z5S9 345 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MISP3Q96FF7 219 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 WWC2-AS2Q96NR7 200 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MS4A10Q96PG2 267 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 PARD6GQ9BYG4 376 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 NPVFQ9HCQ7 196 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ZNF355PQ9NSJ1 428 aa8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TSSC4Q9Y5U2 329 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-204ENST00000577664 DNAH9Q9NYC9 4486 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TRAV30A0A087WSZ9 112 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 FXYD6-FXYD2A0A087WZ82 144 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TAAR5O14804 337 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 PFDN1O60925 122 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CLN5O75503 358 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CST7O76096 145 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CD28P10747 220 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 NUP62P37198 522 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OPRK1P41145 380 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 NPBWR1P48145 328 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 SPSB3Q6PJ21 355 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 KCNRGQ8N5I3 272 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 THAP8Q8NA92 274 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 EEF1AKMT3Q96AZ1 226 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MFFQ9GZY8 342 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 C21orf62Q9NYP8 219 aa8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 LSM4Q9Y4Z0 139 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MFSD2BA6NFX1 497 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ADARB2-AS1A8MUL3 147 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 DFFBO76075 338 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CLEC3BP05452 202 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CTSGP08311 255 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 SLC38A11Q08AI6 406 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 LGALSLQ3ZCW2 172 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ZFP69Q49AA0 526 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 OR8G2PQ6IF36 304 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms