RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 HSPE1P61604 102 aaKnown RBP6.44□□□□□ -1.38
SMG6-218ENST00000575454 H2BFWTQ7Z2G1 175 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 Q8N1X5 172 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 ZFAND3Q9H8U3 227 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 SEPSECSQ9HD40 501 aaKnown RBP6.44□□□□□ -1.38
SMG6-218ENST00000575454 DIABLOQ9NR28 239 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 A0A1B0GU03 582 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 GPR31O00270 319 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 IGHV3-48P01763 117 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 DHRS2Q13268 280 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 OXA1LQ15070 435 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 PSMG4Q5JS54 123 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 LPCAT3Q6P1A2 487 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 SFXN4Q6P4A7 337 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 LGALS14Q8TCE9 139 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 DCANP1Q8TF63 244 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 TMEM230Q96A57 120 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 ZNF2Q9BSG1 426 aaPredicted RBP6.43□□□□□ -1.38
SMG6-218ENST00000575454 AUNIPQ9H7T9 357 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 EHFQ9NZC4 300 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 XCL2Q9UBD3 114 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 BLOC1S6Q9UL45 172 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 TMED3Q9Y3Q3 217 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 RFNGQ9Y644 331 aa6.43□□□□□ -1.38
SMG6-218ENST00000575454 TRAV30A0A087WSZ9 112 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 DBX1A6NMT0 343 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 INS-IGF2F8WCM5 200 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 CLN5O75503 358 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 EMP1P54849 157 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 ZNF705AQ6ZN79 300 aaPredicted RBP6.42□□□□□ -1.38
SMG6-218ENST00000575454 OR6F1Q8NGZ6 308 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 NIPSNAP3BQ9BS92 247 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 SCRT1Q9BWW7 348 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 IFT46Q9NQC8 304 aa6.42□□□□□ -1.38
SMG6-218ENST00000575454 RRP15Q9Y3B9 282 aaKnown RBP6.42□□□□□ -1.38
SMG6-218ENST00000575454 SMIM30A4D0T7 59 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 ZNF705FA8MVS1 300 aaPredicted RBP6.41□□□□□ -1.38
SMG6-218ENST00000575454 H3BMM0 161 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 TMEM127O75204 238 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 ZNF705DP0CH99 300 aaPredicted RBP6.41□□□□□ -1.38
SMG6-218ENST00000575454 ZNF705BP0CI00 300 aaPredicted RBP6.41□□□□□ -1.38
SMG6-218ENST00000575454 RPL5P46777 297 aaKnown RBP6.41□□□□□ -1.38
SMG6-218ENST00000575454 TAS2R46P59540 309 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 C15orf53Q8NAA6 179 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 OR4X1Q8NH49 305 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 SEC22AQ96IW7 307 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 ATG101Q9BSB4 218 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 SCRT2Q9NQ03 307 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 TXNL4BQ9NX01 149 aaKnown RBP6.41□□□□□ -1.38
SMG6-218ENST00000575454 DKK2Q9UBU2 259 aa6.41□□□□□ -1.38
SMG6-218ENST00000575454 ATG12O94817 140 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 FCER2P06734 321 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 NKX2-1P43699 371 aaPredicted RBP6.4□□□□□ -1.38
SMG6-218ENST00000575454 RFX2P48378 723 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 PPP5CP53041 499 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 TNP2Q05952 138 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 C6orf223Q8N319 242 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 OR5H2Q8NGV7 314 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 Q8WTZ3 238 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 PDCD10Q9BUL8 212 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 SSR3Q9UNL2 185 aa6.4□□□□□ -1.38
SMG6-218ENST00000575454 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 NBDYA0A0U1RRE5 68 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 RPS10-NUDT3A0A1W2PQS6 291 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 FAM90A26D6RGX4 464 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 GSTZ1O43708 216 aaPredicted RBP6.39□□□□□ -1.39
SMG6-218ENST00000575454 PMP2P02689 132 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 HNRNPCP07910 306 aaKnown RBP eCLIP6.39□□□□□ -1.393e-7■■□□□ 12.3
SMG6-218ENST00000575454 HLA-DRB4P13762 266 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 HTN3P15516 51 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 OPRK1P41145 380 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 PHLDA2Q53GA4 152 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 FAM222AQ5U5X8 452 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 SPATA31B1PQ5VZV4 182 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 TMEM88Q6PEY1 159 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 C16orf54Q6UWD8 224 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 GSG1LQ6UXU4 331 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 TBC1D26Q86UD7 250 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 SLC35G3Q8N808 338 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 GLMPQ8WWB7 406 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 SLC25A38Q96DW6 304 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 S100A16Q96FQ6 103 aaKnown RBP6.39□□□□□ -1.39
SMG6-218ENST00000575454 YTHDF1Q9BYJ9 559 aaKnown RBP6.39□□□□□ -1.39
SMG6-218ENST00000575454 ENY2Q9NPA8 101 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 GOLT1BQ9Y3E0 138 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 U3KQE9 123 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 HLA-DRB4X5D2U9 266 aa6.39□□□□□ -1.39
SMG6-218ENST00000575454 IGHV3OR16-12A0A075B7B8 117 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 IGKV1-17P01599 117 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 HBE1P02100 147 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 SDC2P34741 201 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 NUP62P37198 522 aaPredicted RBP6.38□□□□□ -1.39
SMG6-218ENST00000575454 ALDH3B2P48448 385 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 HSPA13P48723 471 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 AQP4P55087 323 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 IDNKQ5T6J7 187 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
SMG6-218ENST00000575454 OR5H6Q8NGV6 325 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms