RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PSMB11A5LHX3 300 aa18.95■□□□□ 0.62
NPLOC4-217ENST00000574897 FCN1O00602 326 aa18.95■□□□□ 0.62
NPLOC4-217ENST00000574897 NDUFA6P56556 154 aa18.95■□□□□ 0.62
NPLOC4-217ENST00000574897 FRZBQ92765 325 aa18.95■□□□□ 0.62
NPLOC4-217ENST00000574897 MISP3Q96FF7 219 aa18.95■□□□□ 0.62
NPLOC4-217ENST00000574897 PCP4L1A6NKN8 68 aa18.94■□□□□ 0.62
NPLOC4-217ENST00000574897 SUB1P53999 127 aaKnown RBP eCLIP18.94■□□□□ 0.62
NPLOC4-217ENST00000574897 HILPDAQ9Y5L2 63 aa18.94■□□□□ 0.62
NPLOC4-217ENST00000574897 TIMM23O14925 209 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 GNLYP22749 145 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 CD24P25063 80 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 LHFPL4Q7Z7J7 247 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 PPP1R27Q86WC6 154 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 NEU4Q8WWR8 484 aaPredicted RBP18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 SSBP3Q9BWW4 388 aaPredicted RBP18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 TECRQ9NZ01 308 aaKnown RBP18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 C19orf84I3L1E1 186 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 MT-CO2P00403 227 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 COMPP49747 757 aaPredicted RBP18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 FBLN7Q53RD9 439 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 DTX2Q86UW9 622 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 UHRF2Q96PU4 802 aa18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 SPTAN1Q13813 2472 aaKnown RBP18.93■□□□□ 0.62
NPLOC4-217ENST00000574897 TXNDC17Q9BRA2 123 aa18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 CHODLQ9H9P2 273 aa18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 AMMECR1Q9Y4X0 333 aaPredicted RBP18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 CFAP46Q8IYW2 2715 aa18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 A0A1W2PPQ1 181 aa18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 MOSP00540 346 aa18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 ITLN2Q8WWU7 325 aaPredicted RBP18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 SLC25A33Q9BSK2 321 aa18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 UBTD1Q9HAC8 227 aa18.92■□□□□ 0.62
NPLOC4-217ENST00000574897 LOC105371242A0A075B767 164 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 TRGC1P0CF51 173 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 PATE2Q6UY27 113 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 OCC1Q8TAD7 63 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 ANAPC16Q96DE5 110 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 OR5B12Q96R08 314 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 PHOX2AO14813 284 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 MEOX2P50222 304 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 TPTE2P1Q5T6R2 138 aa18.91■□□□□ 0.62
NPLOC4-217ENST00000574897 TCRBV4S1A1TA0A5B7 111 aa18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 TEX22C9J3V5 150 aa18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 FAM3BP58499 235 aaPredicted RBP18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 FAM167A-AS1Q96KT0 104 aa18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 PYGO2Q9BRQ0 406 aa18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 SLC25A2Q9BXI2 301 aa18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 DMRT1Q9Y5R6 373 aa18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 COL12A1Q99715 3063 aa18.9■□□□□ 0.62
NPLOC4-217ENST00000574897 SNRPCP09234 159 aaKnown RBP18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 C8orf88P0DMB2 117 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 SFTPCP11686 197 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 HTR1DP28221 377 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 THAP8Q8NA92 274 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 GSX1Q9H4S2 264 aaPredicted RBP18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 DNAJC4Q9NNZ3 241 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 GGTLC3B5MD39 225 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 S100PP25815 95 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 GFI1BQ5VTD9 330 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 PQLC2Q6ZP29 291 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 TMEM167BQ9NRX6 74 aa18.89■□□□□ 0.61
NPLOC4-217ENST00000574897 IFITM10A6NMD0 228 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 K7EN84 100 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 PYYP10082 97 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 ZFP36P26651 326 aaKnown RBP18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 CRYBB3P26998 211 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 PLGLAQ15195 96 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 OR11H6Q8NGC7 330 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 OR4X1Q8NH49 305 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 SRSF12Q8WXF0 261 aaKnown RBP18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 C11orf52Q96A22 123 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 COX7A2P2O60397 106 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 OR5AU1Q8NGC0 362 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 DPM3Q9P2X0 92 aa18.88■□□□□ 0.61
NPLOC4-217ENST00000574897 CRYGCP07315 174 aa18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 HOXA5P20719 270 aa18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 GPR6P46095 362 aaPredicted RBP18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 TAS2R45P59539 299 aa18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 MMDQ15546 238 aa18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 SFRP2Q96HF1 295 aa18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 C19orf24Q9BVV8 132 aa18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 ZNF355PQ9NSJ1 428 aa18.87■□□□□ 0.61
NPLOC4-217ENST00000574897 PVRIGQ6DKI7 326 aa18.86■□□□□ 0.61
NPLOC4-217ENST00000574897 CFHR4Q92496 578 aa18.86■□□□□ 0.61
NPLOC4-217ENST00000574897 SRD5A3Q9H8P0 318 aa18.86■□□□□ 0.61
NPLOC4-217ENST00000574897 C10orf113Q5VZT2 155 aa18.86■□□□□ 0.61
NPLOC4-217ENST00000574897 SUMO1P63165 101 aaKnown RBP18.85■□□□□ 0.61
NPLOC4-217ENST00000574897 PDZD11Q5EBL8 140 aa18.85■□□□□ 0.61
NPLOC4-217ENST00000574897 OR2T10Q8NGZ9 312 aa18.85■□□□□ 0.61
NPLOC4-217ENST00000574897 MRPL32Q9BYC8 188 aaKnown RBP18.85■□□□□ 0.61
NPLOC4-217ENST00000574897 TNFRSF19Q9NS68 423 aa18.85■□□□□ 0.61
NPLOC4-217ENST00000574897 UBE2L3P68036 154 aaKnown RBP18.85■□□□□ 0.61
NPLOC4-217ENST00000574897 A0A0U1RQK1 487 aa18.84■□□□□ 0.61
NPLOC4-217ENST00000574897 MDFIC2A0A1B0GVS7 189 aa18.84■□□□□ 0.61
NPLOC4-217ENST00000574897 ODF3BA8MYP8 253 aa18.84■□□□□ 0.61
NPLOC4-217ENST00000574897 M0R1W7 72 aa18.84■□□□□ 0.61
NPLOC4-217ENST00000574897 PRTN3P24158 256 aa18.84■□□□□ 0.61
NPLOC4-217ENST00000574897 DYNAPQ8N1N2 210 aa18.84■□□□□ 0.61
NPLOC4-217ENST00000574897 OR1P1Q8NH06 330 aa18.84■□□□□ 0.61
NPLOC4-217ENST00000574897 F11RQ9Y624 299 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms