RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 APCSP02743 223 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 SLAQ13239 276 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 HARBI1Q96MB7 349 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 COMMD5Q9GZQ3 224 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 DLL1O00548 723 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 DLEU1O43261 78 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 NPSP0C0P6 89 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 TSKUQ8WUA8 353 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 CACNG8Q8WXS5 425 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 LPAR2Q9HBW0 351 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 ASCL3Q9NQ33 180 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 FAM215AQ9Y5M1 114 aa15.45■□□□□ 0.06
SCARF1-206ENST00000573852 USF1P22415 310 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-206ENST00000573852 TRAV34A0A0B4J273 112 aa15.44■□□□□ 0.06
SCARF1-206ENST00000573852 IGHV3-48P01763 117 aa15.44■□□□□ 0.06
SCARF1-206ENST00000573852 C3orf79P0CE67 100 aa15.44■□□□□ 0.06
SCARF1-206ENST00000573852 REG1BP48304 166 aa15.44■□□□□ 0.06
SCARF1-206ENST00000573852 SPATA45Q537H7 98 aa15.44■□□□□ 0.06
SCARF1-206ENST00000573852 OSR1Q8TAX0 266 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-206ENST00000573852 ZNF714Q96N38 554 aa15.44■□□□□ 0.06
SCARF1-206ENST00000573852 AMMECR1Q9Y4X0 333 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-206ENST00000573852 NAV3Q8IVL0 2385 aa15.44■□□□□ 0.06
SCARF1-206ENST00000573852 hADV38S2A0JD32 116 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 RPL8P62917 257 aaKnown RBP15.43■□□□□ 0.06
SCARF1-206ENST00000573852 PATE2Q6UY27 113 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 FNDC4Q9H6D8 234 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-206ENST00000573852 ZNF331Q9NQX6 463 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-206ENST00000573852 ZNF355PQ9NSJ1 428 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 PPP1R14DQ9NXH3 145 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 H0YJW9 148 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 SELENOVP59797 346 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 ERHP84090 104 aaKnown RBP15.43■□□□□ 0.06
SCARF1-206ENST00000573852 MBD6Q96DN6 1003 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 LINC00312Q9Y6C7 94 aa15.43■□□□□ 0.06
SCARF1-206ENST00000573852 PRRX1P54821 245 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 TMEM30BQ3MIR4 351 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 GDF5OSQ5U4N7 250 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 ZNF329Q86UD4 541 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 RP1L1Q8IWN7 2480 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-206ENST00000573852 CGB1A6NKQ9 187 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 COX7A2P2O60397 106 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 APOA2P02652 100 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 CCL3L1P16619 93 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 WT1-ASQ06250 92 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 C3orf36Q3SXR2 165 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 C10orf55Q5SWW7 151 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 TEX36Q5VZQ5 186 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 C18orf32Q8TCD1 76 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 PAXXQ9BUH6 204 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 LAMA5O15230 3695 aa15.42■□□□□ 0.06
SCARF1-206ENST00000573852 NPIPB3Q92617 1050 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 GOLT1BQ9Y3E0 138 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 NTF3P20783 257 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 TFPI2P48307 235 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 CCL8P80075 99 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 FAM27E3Q08E93 113 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 C10orf113Q5VZT2 155 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 NUDT10Q8NFP7 164 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 OR5AN1Q8NGI8 311 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 NUDT11Q96G61 164 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 WNT10AQ9GZT5 417 aa15.41■□□□□ 0.06
SCARF1-206ENST00000573852 IGKV1D-37A0A075B6S9 117 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 PEX7O00628 323 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 FCN3O75636 299 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 REG1AP05451 166 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 TNFSF4P23510 183 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 MFAP2P55001 183 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 DIAPH2-AS1Q14236 149 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 TMEM177Q53S58 311 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 SPACA3Q8IXA5 215 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 NUP35Q8NFH5 326 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 MRPL36Q9P0J6 103 aaKnown RBP15.4■□□□□ 0.06
SCARF1-206ENST00000573852 SPAARA0A1B0GVQ0 90 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 DPRXA6NFQ7 191 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 GAGE1Q13065 139 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 MMDQ15546 238 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 FAM231DQ6ZW35 169 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 WIPF2Q8TF74 440 aaPredicted RBP15.4■□□□□ 0.06
SCARF1-206ENST00000573852 FLYWCH2Q96CP2 140 aaKnown RBP15.4■□□□□ 0.06
SCARF1-206ENST00000573852 FSTL3O95633 263 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 FXYD5Q96DB9 178 aa15.4■□□□□ 0.06
SCARF1-206ENST00000573852 ZNF430Q9H8G1 570 aaPredicted RBP15.4■□□□□ 0.06
SCARF1-206ENST00000573852 INS-IGF2F8WCM5 200 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 IGLC2P0DOY2 106 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 IGLC3P0DOY3 106 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 TBR1Q16650 682 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 PRR27Q6MZM9 219 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 ZCCHC24Q8N2G6 241 aaKnown RBP15.39■□□□□ 0.05
SCARF1-206ENST00000573852 DEFB124Q8NES8 71 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 GAL3ST2Q9H3Q3 398 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 PPIAL4AQ9Y536 164 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 PLXNB1O43157 2135 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 HYPMO75409 117 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 PLAUP00749 431 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 CD40P25942 277 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 GRAMD2BQ96HH9 432 aa15.39■□□□□ 0.05
SCARF1-206ENST00000573852 TCRBV4S1A1TA0A5B7 111 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 FTH1P19P0C7X4 201 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 GNG5P63218 68 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 TNXAQ16473 311 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms