RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PRRT1Q99946 306 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 C6orf62Q9GZU0 229 aaPredicted RBP12.9□□□□□ -0.34
SMG6-214ENST00000573827 VSIRQ9H7M9 311 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 KMT2AQ03164 3969 aa12.89□□□□□ -0.35
SMG6-214ENST00000573827 GNG7O60262 68 aa12.89□□□□□ -0.35
SMG6-214ENST00000573827 APOHP02749 345 aaPredicted RBP12.89□□□□□ -0.35
SMG6-214ENST00000573827 SNCAP37840 140 aa12.89□□□□□ -0.35
SMG6-214ENST00000573827 NPBWR1P48145 328 aa12.89□□□□□ -0.35
SMG6-214ENST00000573827 SPCS3P61009 180 aa12.89□□□□□ -0.35
SMG6-214ENST00000573827 TMEM187Q14656 261 aa12.89□□□□□ -0.35
SMG6-214ENST00000573827 GALNT14Q96FL9 552 aa12.89□□□□□ -0.35
SMG6-214ENST00000573827 RSL24D1Q9UHA3 163 aaKnown RBP12.89□□□□□ -0.35
SMG6-214ENST00000573827 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
SMG6-214ENST00000573827 IGHV3OR16-13A0A075B7E8 117 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 IGHV3-74A0A0B4J1X5 117 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 OR4C46A6NHA9 309 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 YIF1AO95070 293 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
SMG6-214ENST00000573827 SUPT4H1P63272 117 aaKnown RBP12.88□□□□□ -0.35
SMG6-214ENST00000573827 DHODHQ02127 395 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 ZNF600Q6ZNG1 722 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 OR4X1Q8NH49 305 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 ST8SIA2Q92186 375 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 TRIM63Q969Q1 353 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.88□□□□□ -0.35
SMG6-214ENST00000573827 PRR13Q9NZ81 148 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 CACNG5Q9UF02 275 aa12.88□□□□□ -0.35
SMG6-214ENST00000573827 CLN5O75503 358 aa12.87□□□□□ -0.35
SMG6-214ENST00000573827 KLF9Q13886 244 aaPredicted RBP12.87□□□□□ -0.35
SMG6-214ENST00000573827 ZNF124Q15973 351 aa12.87□□□□□ -0.35
SMG6-214ENST00000573827 TMEM268Q5VZI3 342 aa12.87□□□□□ -0.35
SMG6-214ENST00000573827 RBM38Q9H0Z9 239 aaKnown RBP12.87□□□□□ -0.35
SMG6-214ENST00000573827 PUS1Q9Y606 427 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMG6-214ENST00000573827 V9GYH0 126 aa12.87□□□□□ -0.35
SMG6-214ENST00000573827 DNAH10Q8IVF4 4471 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 KIR2DL5BA0A0G2JN68 375 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 KIR2DL5BA0A0G2JPC4 375 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 CORTO00230 105 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 Q6ZWC4 215 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 KIR2DL5AQ8N109 375 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 MCFD2Q8NI22 146 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 IL22RA2Q969J5 263 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 PDCD10Q9BUL8 212 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
SMG6-214ENST00000573827 SUB1P53999 127 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMG6-214ENST00000573827 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMG6-214ENST00000573827 ZNF79Q15937 498 aa12.85□□□□□ -0.35
SMG6-214ENST00000573827 C2orf83Q53S99 150 aa12.85□□□□□ -0.35
SMG6-214ENST00000573827 APRG1Q8IVJ8 170 aa12.85□□□□□ -0.35
SMG6-214ENST00000573827 HTR2BP41595 481 aa12.84□□□□□ -0.35
SMG6-214ENST00000573827 PRSS54Q6PEW0 395 aa12.84□□□□□ -0.35
SMG6-214ENST00000573827 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
SMG6-214ENST00000573827 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
SMG6-214ENST00000573827 GINS3Q9BRX5 216 aa12.84□□□□□ -0.35
SMG6-214ENST00000573827 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
SMG6-214ENST00000573827 SCP2D1Q9UJQ7 156 aa12.84□□□□□ -0.35
SMG6-214ENST00000573827 DNAH6Q9C0G6 4158 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 UBE2CO00762 179 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 DFFBO76075 338 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 NXPH3O95157 252 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 CRYBB3P26998 211 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 OPRK1P41145 380 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 APOC4P55056 127 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 DEFB135Q30KP9 77 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 IL17DQ8TAD2 202 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 RNF183Q96D59 192 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 ENY2Q9NPA8 101 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 U3KQE9 123 aa12.83□□□□□ -0.36
SMG6-214ENST00000573827 A0A0B4J2A0 478 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 IGHV3-66A0A0C4DH42 116 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 SPRY2O43597 315 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 NOL3O60936 208 aaKnown RBP12.82□□□□□ -0.36
SMG6-214ENST00000573827 RPL35AP18077 110 aaKnown RBP12.82□□□□□ -0.36
SMG6-214ENST00000573827 TFPI2P48307 235 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 TNFRSF9Q07011 255 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 TIGITQ495A1 244 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 CCDC190Q86UF4 302 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 SLC24A4Q8NFF2 622 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 RNASEH2CQ8TDP1 164 aaKnown RBP12.82□□□□□ -0.36
SMG6-214ENST00000573827 MS4A6AQ9H2W1 248 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 HEYLQ9NQ87 328 aaPredicted RBP12.82□□□□□ -0.36
SMG6-214ENST00000573827 MCUBQ9NWR8 336 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 HSPB7Q9UBY9 170 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 SHPKQ9UHJ6 478 aa12.82□□□□□ -0.36
SMG6-214ENST00000573827 FRAS1Q86XX4 4008 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 AGRNO00468 2067 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 TRAV2A0A0B4J234 112 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 CD5P06127 495 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms