RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CLDN34H7C241 214 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 VENTXO95231 258 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 SEC11BP0C7V7 166 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 FCGR2BP31994 310 aaPredicted RBP8.21□□□□□ -1.09
SMG6-213ENST00000573166 GALR1P47211 349 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 CX3CL1P78423 397 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 ARL16Q0P5N6 197 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 PRR27Q6MZM9 219 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 ZNF880Q6PDB4 577 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 STXBP6Q8NFX7 210 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 IGSF23A1L1A6 192 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 FAM71F2Q6NXP2 309 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 LRTM2Q8N967 370 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 SEC11CQ9BY50 192 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 FOXA2Q9Y261 457 aaPredicted RBP8.21□□□□□ -1.09
SMG6-213ENST00000573166 TRAV3A0A0B4J244 114 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 A0A1W2PS18 150 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 IGKV1-5P01602 117 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 IL4P05112 153 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 ZNF134P52741 427 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 DLK1P80370 383 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 RHOGP84095 191 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 PRCDQ00LT1 54 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 ZNF90Q03938 601 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 RBPMS2Q6ZRY4 209 aaKnown RBP8.21□□□□□ -1.1
SMG6-213ENST00000573166 ZNF331Q9NQX6 463 aaPredicted RBP8.21□□□□□ -1.1
SMG6-213ENST00000573166 SIGLEC9Q9Y336 463 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 IGHV3OR16-8A0A075B7F1 116 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 TRAV41A0A0B4J266 112 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 TEX50A0A1B0GTY4 177 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 RELQ04864 619 aaPredicted RBP8.21□□□□□ -1.1
SMG6-213ENST00000573166 AWAT1Q58HT5 328 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 CLEC19AQ6UXS0 136 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 C1orf122Q6ZSJ8 110 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 KIR3DL3Q8N743 410 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 TMEM167AQ8TBQ9 72 aa8.21□□□□□ -1.1
SMG6-213ENST00000573166 ID3Q02535 119 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 OR10D4PQ8NGN7 298 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 HECTD1Q9ULT8 2610 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 CTXND1A0A1B0GTU2 59 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 NPPCP23582 126 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 LINC00311Q8N616 119 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 IGHV3-49A0A0A0MS15 119 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 TMEM177Q53S58 311 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 LAMA1P25391 3075 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 EYSQ5T1H1 3165 aa8.2□□□□□ -1.1
SMG6-213ENST00000573166 ZNF329Q86UD4 541 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 RNASEH2CQ8TDP1 164 aaKnown RBP8.19□□□□□ -1.1
SMG6-213ENST00000573166 TMEM208Q9BTX3 173 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 DNAJC4Q9NNZ3 241 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 ACANP16112 2415 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 ZNF207O43670 478 aaKnown RBP8.19□□□□□ -1.1
SMG6-213ENST00000573166 CD99P14209 185 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 ADCYAP1P18509 176 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 DIAPH2-AS1Q14236 149 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 HABP2Q14520 560 aaPredicted RBP8.19□□□□□ -1.1
SMG6-213ENST00000573166 CACNG8Q8WXS5 425 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 PAXXQ9BUH6 204 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 ZNF586Q9NXT0 402 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 HSPB7Q9UBY9 170 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 ANAPC10Q9UM13 185 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 MGAQ8IWI9 3026 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 VPS13AQ96RL7 3174 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 C7orf77A4D0Y5 90 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 FAM90A9PA6NNJ1 464 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 FOXI3A8MTJ6 420 aaPredicted RBP8.19□□□□□ -1.1
SMG6-213ENST00000573166 MYOD1P15172 320 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 ZNF137PP52743 207 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 RANP62826 216 aaKnown RBP8.19□□□□□ -1.1
SMG6-213ENST00000573166 GAMTQ14353 236 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 KLF17Q5JT82 389 aaPredicted RBP8.19□□□□□ -1.1
SMG6-213ENST00000573166 BPIFA4PQ86YQ2 179 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 OR5AU1Q8NGC0 362 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 RNF126Q9BV68 326 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 ZNF257Q9Y2Q1 563 aa8.19□□□□□ -1.1
SMG6-213ENST00000573166 PSMB11A5LHX3 300 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 MDKP21741 143 aaPredicted RBP8.18□□□□□ -1.1
SMG6-213ENST00000573166 SMIM15Q7Z3B0 74 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 RFNGQ9Y644 331 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 ZFP36P26651 326 aaKnown RBP8.18□□□□□ -1.1
SMG6-213ENST00000573166 DLX6P56179 175 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 ZNF585BQ52M93 769 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 KHDC3LQ587J8 217 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 NMSQ5H8A3 153 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 BSCL2Q96G97 398 aaPredicted RBP8.18□□□□□ -1.1
SMG6-213ENST00000573166 SH3BGRL3Q9H299 93 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 ARHGAP32A7KAX9 2087 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 OR2T8A6NH00 312 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 CXorf1O96002 111 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 FABP4P15090 132 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 C8orf46Q8TAG6 207 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 FAM210BQ96KR6 192 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 TCRBV4S1A1TA0A5B7 111 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 SMIM6P0DI80 62 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 IGFBP2P18065 325 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 RELBQ01201 579 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 TFF3Q07654 80 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 OR5I1Q13606 314 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms