RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TMEM268Q5VZI3 342 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
SMG6-212ENST00000573153 OR52B4Q8NGK2 314 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 GPR146Q96CH1 333 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 FAM110AQ9BQ89 295 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 MCUBQ9NWR8 336 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 CACNG5Q9UF02 275 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 GNG7O60262 68 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 IGHV3-48P01763 117 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 PYDC2Q56P42 97 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 TOMM5Q8N4H5 51 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
SMG6-212ENST00000573153 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 MRPL36Q9P0J6 103 aaKnown RBP12.88□□□□□ -0.35
SMG6-212ENST00000573153 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
SMG6-212ENST00000573153 A0A0B4J2A0 478 aa12.87□□□□□ -0.35
SMG6-212ENST00000573153 PIGBOS1A0A0B4J2F0 54 aa12.87□□□□□ -0.35
SMG6-212ENST00000573153 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
SMG6-212ENST00000573153 HTR2BP41595 481 aa12.87□□□□□ -0.35
SMG6-212ENST00000573153 SRPXP78539 464 aa12.87□□□□□ -0.35
SMG6-212ENST00000573153 NMSQ5H8A3 153 aa12.87□□□□□ -0.35
SMG6-212ENST00000573153 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
SMG6-212ENST00000573153 SHPKQ9UHJ6 478 aa12.87□□□□□ -0.35
SMG6-212ENST00000573153 EPPK1P58107 5090 aaKnown RBP12.86□□□□□ -0.35
SMG6-212ENST00000573153 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
SMG6-212ENST00000573153 TMEM50AO95807 157 aa12.86□□□□□ -0.35
SMG6-212ENST00000573153 SULT1A3P0DMM9 295 aa12.86□□□□□ -0.35
SMG6-212ENST00000573153 SULT1A4P0DMN0 295 aa12.86□□□□□ -0.35
SMG6-212ENST00000573153 LYL1P12980 280 aa12.86□□□□□ -0.35
SMG6-212ENST00000573153 C2orf83Q53S99 150 aa12.86□□□□□ -0.35
SMG6-212ENST00000573153 OR4X1Q8NH49 305 aa12.86□□□□□ -0.35
SMG6-212ENST00000573153 SLC25A21Q9BQT8 299 aaPredicted RBP12.86□□□□□ -0.35
SMG6-212ENST00000573153 CHEK1O14757 476 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 CLN5O75503 358 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 ANXA3P12429 323 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 AKR1C4P17516 323 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 CCR6P51684 374 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 TMEM128Q5BJH2 165 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 SPANXN2Q5MJ10 180 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 FAM90A2PQ658T7 463 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 ZFAND6Q6FIF0 208 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 ZNF600Q6ZNG1 722 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 GINS3Q9BRX5 216 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 SRRQ9GZT4 340 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 ZFAND3Q9H8U3 227 aa12.85□□□□□ -0.35
SMG6-212ENST00000573153 TRAV14DV4A0A0A6YYC5 116 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 DUXBA0A1W2PPF3 345 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 LGI3Q8N145 548 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 LRTM2Q8N967 370 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 RNASEH2CQ8TDP1 164 aaKnown RBP12.84□□□□□ -0.35
SMG6-212ENST00000573153 TMEM170AQ8WVE7 144 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 RNF2Q99496 336 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 RHPN1-AS1Q9BWJ2 59 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 HEYLQ9NQ87 328 aaPredicted RBP12.84□□□□□ -0.35
SMG6-212ENST00000573153 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
SMG6-212ENST00000573153 RPS10-NUDT3A0A1W2PQS6 291 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 OR4C46A6NHA9 309 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 YIF1AO95070 293 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 CD5P06127 495 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 OPRK1P41145 380 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 SMCO1Q147U7 214 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 LYZL2Q7Z4W2 148 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 LILRB2Q8N423 598 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 SLC24A4Q8NFF2 622 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 OVOL2Q9BRP0 275 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 GGTLC1Q9BX51 225 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
SMG6-212ENST00000573153 LCE6AA0A183 80 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 A0A1B0GU03 582 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 CEBPZOSA8MTT3 80 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 SLC25A4P12235 298 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 BMI1P35226 326 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 TNFRSF9Q07011 255 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 MLANAQ16655 118 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 NOXA1Q86UR1 476 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 UBQLN2Q9UHD9 624 aa12.82□□□□□ -0.36
SMG6-212ENST00000573153 PUS1Q9Y606 427 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMG6-212ENST00000573153 TRAV30A0A087WSZ9 112 aa12.81□□□□□ -0.36
SMG6-212ENST00000573153 LOC102724200A0A096LPH7 203 aaPredicted RBP12.81□□□□□ -0.36
SMG6-212ENST00000573153 SCGB2A1O75556 95 aa12.81□□□□□ -0.36
SMG6-212ENST00000573153 IGKV1-17P01599 117 aa12.81□□□□□ -0.36
SMG6-212ENST00000573153 APOHP02749 345 aaPredicted RBP12.81□□□□□ -0.36
SMG6-212ENST00000573153 SLC25A6P12236 298 aa12.81□□□□□ -0.36
SMG6-212ENST00000573153 ATP5IP56385 69 aaPredicted RBP12.81□□□□□ -0.36
SMG6-212ENST00000573153 U3KQ87 197 aa12.81□□□□□ -0.36
SMG6-212ENST00000573153 IGHV3-49A0A0A0MS15 119 aa12.8□□□□□ -0.36
SMG6-212ENST00000573153 PITX3O75364 302 aa12.8□□□□□ -0.36
SMG6-212ENST00000573153 NPY1RP25929 384 aa12.8□□□□□ -0.36
SMG6-212ENST00000573153 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
SMG6-212ENST00000573153 PRSS54Q6PEW0 395 aa12.8□□□□□ -0.36
SMG6-212ENST00000573153 TMED4Q7Z7H5 227 aa12.8□□□□□ -0.36
SMG6-212ENST00000573153 NDUFA13Q9P0J0 144 aa12.8□□□□□ -0.36
SMG6-212ENST00000573153 BIRC6Q9NR09 4857 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms