RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 HSPE1P61604 102 aaKnown RBP13.75□□□□□ -0.21
NUP88-203ENST00000572019 MORN3Q6PF18 240 aaPredicted RBP13.75□□□□□ -0.21
NUP88-203ENST00000572019 HLA-DMAP28067 261 aa13.74□□□□□ -0.21
NUP88-203ENST00000572019 TAS2R20P59543 309 aa13.74□□□□□ -0.21
NUP88-203ENST00000572019 GRAMD2BQ96HH9 432 aa13.74□□□□□ -0.21
NUP88-203ENST00000572019 IGKV1-5P01602 117 aa13.73□□□□□ -0.21
NUP88-203ENST00000572019 RNASE2P10153 161 aaKnown RBP13.73□□□□□ -0.21
NUP88-203ENST00000572019 NPPCP23582 126 aa13.73□□□□□ -0.21
NUP88-203ENST00000572019 CRYBB3P26998 211 aa13.73□□□□□ -0.21
NUP88-203ENST00000572019 NPBWR1P48145 328 aa13.73□□□□□ -0.21
NUP88-203ENST00000572019 ERHP84090 104 aaKnown RBP13.73□□□□□ -0.21
NUP88-203ENST00000572019 TMEM41BQ5BJD5 291 aa13.73□□□□□ -0.21
NUP88-203ENST00000572019 OR6F1Q8NGZ6 308 aa13.73□□□□□ -0.21
NUP88-203ENST00000572019 RAB40CQ96S21 281 aa13.73□□□□□ -0.21
NUP88-203ENST00000572019 IGKV1-17P01599 117 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 P0DMU3 169 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 FAM231AP0DMU4 169 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 FAM231CP0DMU5 169 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 TAS2R46P59540 309 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 Q6ZR54 194 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 FCGR1BQ92637 280 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 NDUFAF3Q9BU61 184 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 XCL2Q9UBD3 114 aa13.72□□□□□ -0.21
NUP88-203ENST00000572019 A0A0B4J293 547 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 P0C879 139 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 LGALS9BQ3B8N2 356 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 TIGITQ495A1 244 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 PSMG4Q5JS54 123 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 TMEM69Q5SWH9 247 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 METTL26Q96S19 204 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 TMEM231Q9H6L2 316 aa13.71□□□□□ -0.21
NUP88-203ENST00000572019 FAM212BQ9NTI7 297 aaPredicted RBP13.71□□□□□ -0.21
NUP88-203ENST00000572019 CLN5O75503 358 aa13.7□□□□□ -0.22
NUP88-203ENST00000572019 ETV6P41212 452 aa13.7□□□□□ -0.22
NUP88-203ENST00000572019 DEFB1P60022 68 aa13.7□□□□□ -0.22
NUP88-203ENST00000572019 S100A16Q96FQ6 103 aaKnown RBP13.7□□□□□ -0.22
NUP88-203ENST00000572019 PLA2G2EQ9NZK7 142 aa13.7□□□□□ -0.22
NUP88-203ENST00000572019 RAB26Q9ULW5 256 aa13.7□□□□□ -0.22
NUP88-203ENST00000572019 U3KQE9 123 aa13.7□□□□□ -0.22
NUP88-203ENST00000572019 CD74P04233 296 aa13.69□□□□□ -0.22
NUP88-203ENST00000572019 DHRS2Q13268 280 aa13.69□□□□□ -0.22
NUP88-203ENST00000572019 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
NUP88-203ENST00000572019 SAMD12Q8N8I0 201 aa13.69□□□□□ -0.22
NUP88-203ENST00000572019 GLMPQ8WWB7 406 aa13.69□□□□□ -0.22
NUP88-203ENST00000572019 A0A0G2JRQ6 117 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 A0A1W2PS18 150 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 PI3P19957 117 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 SNCAP37840 140 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 GSG1LQ6UXU4 331 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 Q6ZRM9 215 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 GPX8Q8TED1 209 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 TP53RKQ96S44 253 aa13.68□□□□□ -0.22
NUP88-203ENST00000572019 HELTA6NFD8 242 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 INS-IGF2F8WCM5 200 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 PRSS3P35030 304 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 OPRK1P41145 380 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 EMP1P54849 157 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 TSPAN5P62079 268 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 NEDD8Q15843 81 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 C16orf54Q6UWD8 224 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 CENPSQ8N2Z9 138 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 SLC35G3Q8N808 338 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 TMEM230Q96A57 120 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 VCX3BQ9H321 246 aa13.67□□□□□ -0.22
NUP88-203ENST00000572019 H3BMM0 161 aa13.66□□□□□ -0.22
NUP88-203ENST00000572019 RPS19P39019 145 aaKnown RBP13.66□□□□□ -0.22
NUP88-203ENST00000572019 FXYD7P58549 80 aa13.66□□□□□ -0.22
NUP88-203ENST00000572019 GDF5OSQ5U4N7 250 aa13.66□□□□□ -0.22
NUP88-203ENST00000572019 LRP1BQ9NZR2 4599 aa13.65□□□□□ -0.22
NUP88-203ENST00000572019 FAM90A26D6RGX4 464 aa13.65□□□□□ -0.22
NUP88-203ENST00000572019 M0QYG6 137 aa13.65□□□□□ -0.22
NUP88-203ENST00000572019 IFNA10P01566 189 aa13.65□□□□□ -0.22
NUP88-203ENST00000572019 IFNA17P01571 189 aa13.65□□□□□ -0.22
NUP88-203ENST00000572019 UCP3P55916 312 aa13.65□□□□□ -0.22
NUP88-203ENST00000572019 USF2Q15853 346 aaPredicted RBP13.65□□□□□ -0.22
NUP88-203ENST00000572019 BSXQ3C1V8 233 aa13.65□□□□□ -0.22
NUP88-203ENST00000572019 ZNF705AQ6ZN79 300 aaPredicted RBP13.65□□□□□ -0.22
NUP88-203ENST00000572019 IGLC1P0CG04 106 aa13.64□□□□□ -0.23
NUP88-203ENST00000572019 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
NUP88-203ENST00000572019 LPCAT3Q6P1A2 487 aa13.64□□□□□ -0.23
NUP88-203ENST00000572019 ZNF705FA8MVS1 300 aaPredicted RBP13.63□□□□□ -0.23
NUP88-203ENST00000572019 ZNF705DP0CH99 300 aaPredicted RBP13.63□□□□□ -0.23
NUP88-203ENST00000572019 ZNF705BP0CI00 300 aaPredicted RBP13.63□□□□□ -0.23
NUP88-203ENST00000572019 SP6Q3SY56 376 aa13.63□□□□□ -0.23
NUP88-203ENST00000572019 SNX29P2Q8IUI4 249 aa13.63□□□□□ -0.23
NUP88-203ENST00000572019 UBE2DNLQ8IWF7 75 aa13.63□□□□□ -0.23
NUP88-203ENST00000572019 CORTO00230 105 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 NXPH3O95157 252 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 IGKV3-20P01619 116 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 HNRNPCP07910 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
NUP88-203ENST00000572019 NPY1RP25929 384 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 S100GP29377 79 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 RPL5P46777 297 aaKnown RBP13.62□□□□□ -0.23
NUP88-203ENST00000572019 AKR1C2P52895 323 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 LSM3P62310 102 aaKnown RBP13.62□□□□□ -0.23
NUP88-203ENST00000572019 DHODHQ02127 395 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 PRSS54Q6PEW0 395 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 TMEM170AQ8WVE7 144 aa13.62□□□□□ -0.23
NUP88-203ENST00000572019 IGHV3OR16-12A0A075B7B8 117 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms