RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 NDUFB6O95139 128 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 SFT2D2O95562 160 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 TMEM50AO95807 157 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 VAMP1P23763 118 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 BTCP35070 178 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 CD81P60033 236 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 PPP1R1AQ13522 171 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 MLANAQ16655 118 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 GUCA2BQ16661 112 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 TMEM170AQ8WVE7 144 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 OR10C1Q96KK4 312 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 C20orf24Q9BUV8 137 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 MRPL36Q9P0J6 103 aaKnown RBP13.55□□□□□ -0.24
LITAF-204ENST00000570798 U3KQK5 164 aa13.55□□□□□ -0.24
LITAF-204ENST00000570798 PITX3O75364 302 aa13.54□□□□□ -0.24
LITAF-204ENST00000570798 NXPH3O95157 252 aa13.54□□□□□ -0.24
LITAF-204ENST00000570798 UBE2MP61081 183 aaKnown RBP13.54□□□□□ -0.24
LITAF-204ENST00000570798 TNFRSF9Q07011 255 aa13.54□□□□□ -0.24
LITAF-204ENST00000570798 SLC24A4Q8NFF2 622 aa13.54□□□□□ -0.24
LITAF-204ENST00000570798 C7orf50Q9BRJ6 194 aaKnown RBP13.54□□□□□ -0.24
LITAF-204ENST00000570798 A6NHS1 94 aa13.53□□□□□ -0.24
LITAF-204ENST00000570798 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
LITAF-204ENST00000570798 CLN5O75503 358 aa13.53□□□□□ -0.24
LITAF-204ENST00000570798 OPRK1P41145 380 aa13.53□□□□□ -0.24
LITAF-204ENST00000570798 LINC00322Q6ZN03 302 aaPredicted RBP13.53□□□□□ -0.24
LITAF-204ENST00000570798 LINC00299Q6ZSB3 139 aa13.53□□□□□ -0.24
LITAF-204ENST00000570798 OR4X1Q8NH49 305 aa13.53□□□□□ -0.24
LITAF-204ENST00000570798 HIPK2Q9H2X6 1198 aa13.53□□□□□ -0.24
LITAF-204ENST00000570798 SMPXQ9UHP9 88 aa13.53□□□□□ -0.24
LITAF-204ENST00000570798 LINC00854A0A1B0GVQ3 168 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 CENPXA8MT69 81 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 PLA2G10O15496 165 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 SCAF4O95104 1147 aaKnown RBP13.52□□□□□ -0.25
LITAF-204ENST00000570798 SLC25A6P12236 298 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 TOMM20LQ6UXN7 152 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 RNASEH2CQ8TDP1 164 aaKnown RBP13.52□□□□□ -0.25
LITAF-204ENST00000570798 TM2D3Q9BRN9 247 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 RBKSQ9H477 322 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 FLVCR2Q9UPI3 526 aa13.52□□□□□ -0.25
LITAF-204ENST00000570798 HUWE1Q7Z6Z7 4374 aaKnown RBP13.52□□□□□ -0.25
LITAF-204ENST00000570798 IGHV7-4-1A0A0J9YVY3 117 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 TSPAN4O14817 238 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 YIF1AO95070 293 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 NPY1RP25929 384 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 ZNF600Q6ZNG1 722 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 RBPMS2Q6ZRY4 209 aaKnown RBP13.51□□□□□ -0.25
LITAF-204ENST00000570798 OR1S1Q8NH92 325 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 DTD1Q8TEA8 209 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 WWC2-AS2Q96NR7 200 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 TUBA4BQ9H853 241 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 ZFAND3Q9H8U3 227 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 TMED3Q9Y3Q3 217 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 U3KQ87 197 aa13.51□□□□□ -0.25
LITAF-204ENST00000570798 RPS10-NUDT3A0A1W2PQS6 291 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 C9orf170A2RU37 121 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 OR11H12B2RN74 326 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 CHEK1O14757 476 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 PRSS54Q6PEW0 395 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 SLC16A13Q7RTY0 426 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 NOXA1Q86UR1 476 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 DEFB125Q8N687 156 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 OR52B4Q8NGK2 314 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 SPAG8Q99932 426 aaPredicted RBP13.5□□□□□ -0.25
LITAF-204ENST00000570798 WFDC10AQ9H1F0 79 aa13.5□□□□□ -0.25
LITAF-204ENST00000570798 TRAV30A0A087WSZ9 112 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 TRAV14DV4A0A0A6YYC5 116 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 SLC25A4P12235 298 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 HAGHQ16775 308 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 LAMTOR1Q6IAA8 161 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 TMEM116Q8NCL8 245 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 RCHY1Q96PM5 261 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 RHPN1-AS1Q9BWJ2 59 aa13.49□□□□□ -0.25
LITAF-204ENST00000570798 PUS1Q9Y606 427 aaKnown RBP eCLIP13.49□□□□□ -0.25
LITAF-204ENST00000570798 FAM90A26D6RGX4 464 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 IFNA10P01566 189 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 HOXB5P09067 269 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 OR4E1P0C645 316 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
LITAF-204ENST00000570798 DHRS2Q13268 280 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 GGNBP1Q5YKI7 109 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 RNF2Q99496 336 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 GINS3Q9BRX5 216 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 CCDC32Q9BV29 185 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 ZMAT4Q9H898 229 aa13.48□□□□□ -0.25
LITAF-204ENST00000570798 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 RBMY1BA6NDE4 496 aaKnown RBP13.47□□□□□ -0.25
LITAF-204ENST00000570798 RBMY1EA6NEQ0 496 aaKnown RBP13.47□□□□□ -0.25
LITAF-204ENST00000570798 LYRM1O43325 122 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 RBMY1DP0C7P1 496 aaKnown RBP13.47□□□□□ -0.25
LITAF-204ENST00000570798 IGLC1P0CG04 106 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 FAM90A2PQ658T7 463 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 ETFRF1Q6IPR1 90 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 LYG2Q86SG7 212 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 VSIRQ9H7M9 311 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 SRD5A3Q9H8P0 318 aa13.47□□□□□ -0.25
LITAF-204ENST00000570798 ANXA7P20073 488 aaKnown RBP13.46□□□□□ -0.25
LITAF-204ENST00000570798 RND2P52198 227 aa13.46□□□□□ -0.25
LITAF-204ENST00000570798 TIGITQ495A1 244 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 299.1 ms