RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ZNF257Q9Y2Q1 563 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 PTPRZ1P23471 2315 aaPredicted RBP12.59□□□□□ -0.39
SMG6-207ENST00000570756 A0A1B0GXF2 115 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 PRR33A8MZF0 331 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 F2RL2O00254 374 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 PEX7O00628 323 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 ZNF134P52741 427 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 LOXL3P58215 753 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 HBBP68871 147 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 PET117Q6UWS5 81 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 LINC00479Q96M42 142 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 DCHS1Q96JQ0 3298 aa12.59□□□□□ -0.39
SMG6-207ENST00000570756 DUSP3P51452 185 aaPredicted RBP12.58□□□□□ -0.4
SMG6-207ENST00000570756 PRCDQ00LT1 54 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 CR1LQ2VPA4 569 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 FAM71F2Q6NXP2 309 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
SMG6-207ENST00000570756 SMIM12Q96EX1 92 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 ADTRPQ96IZ2 230 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 ZPBPQ9BS86 351 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 PEF1Q9UBV8 284 aaKnown RBP12.58□□□□□ -0.4
SMG6-207ENST00000570756 GVINP1Q7Z2Y8 2422 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 FAM186AA6NE01 2351 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 hDV102S1A0JD36 115 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 MGST3O14880 152 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 TIMM8AO60220 97 aaPredicted RBP12.58□□□□□ -0.4
SMG6-207ENST00000570756 OR5AL1P0C617 328 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
SMG6-207ENST00000570756 CT55Q8WUE5 264 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 URB1-AS1Q96HZ7 61 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 SLC25A2Q9BXI2 301 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 ARRDC1-AS1Q9H2J1 176 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 MS4A6AQ9H2W1 248 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 NCOR1P1Q9H4R4 102 aa12.58□□□□□ -0.4
SMG6-207ENST00000570756 GAGE12BA1L429 117 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 IGHV3-13P01766 116 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 IGHV3-7P01780 117 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 POU2AF1Q16633 256 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 LRRC29Q8WV35 223 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 FAM167A-AS1Q96KT0 104 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 SOX21Q9Y651 276 aaPredicted RBP12.57□□□□□ -0.4
SMG6-207ENST00000570756 CER1O95813 267 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 LIPFP07098 398 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 PSG9Q00887 426 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 C2orf83Q53S99 150 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 INO80CQ6PI98 192 aaPredicted RBP12.57□□□□□ -0.4
SMG6-207ENST00000570756 C6orf15Q6UXA7 325 aaPredicted RBP12.57□□□□□ -0.4
SMG6-207ENST00000570756 MOB3BQ86TA1 216 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 MAP1LC3CQ9BXW4 147 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 TP73-AS1Q9UF72 201 aa12.57□□□□□ -0.4
SMG6-207ENST00000570756 MZT1Q08AG7 82 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 TCF15Q12870 199 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 SSX8Q7RTT4 187 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 ZNF329Q86UD4 541 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 PRSS33Q8NF86 280 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 FREM2Q5SZK8 3169 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 ASPHD1Q5U4P2 390 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 ZNF714Q96N38 554 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
SMG6-207ENST00000570756 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
SMG6-207ENST00000570756 SH2D7A6NKC9 451 aaPredicted RBP12.55□□□□□ -0.4
SMG6-207ENST00000570756 SAA2P0DJI9 122 aaPredicted RBP12.55□□□□□ -0.4
SMG6-207ENST00000570756 MYOD1P15172 320 aa12.55□□□□□ -0.4
SMG6-207ENST00000570756 CALYQ9NYX4 217 aa12.55□□□□□ -0.4
SMG6-207ENST00000570756 BPIFB3P59826 476 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 CD69Q07108 199 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 CACNG8Q8WXS5 425 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 HSPB8Q9UJY1 196 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 TRAV5A0A0B4J249 113 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 PSMB11A5LHX3 300 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 CORTO00230 105 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 COX7A2P2O60397 106 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
SMG6-207ENST00000570756 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 CEP250Q9BV73 2442 aa12.54□□□□□ -0.4
SMG6-207ENST00000570756 A8MWL6 223 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 UPK2O00526 184 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 IGHV1-2P23083 117 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
SMG6-207ENST00000570756 RPP21Q9H633 154 aaKnown RBP12.53□□□□□ -0.4
SMG6-207ENST00000570756 C7orf69Q9H7B7 122 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 SPTBN2O15020 2390 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 PCSK5Q92824 1860 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 VWC2LB2RUY7 222 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 LYZL6O75951 148 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 GPR183P32249 361 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 CT83Q5H943 113 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 C10orf113Q5VZT2 155 aa12.53□□□□□ -0.4
SMG6-207ENST00000570756 PYYP10082 97 aa12.52□□□□□ -0.4
SMG6-207ENST00000570756 HOXC12P31275 282 aa12.52□□□□□ -0.4
SMG6-207ENST00000570756 CT45A1Q5HYN5 189 aa12.52□□□□□ -0.4
SMG6-207ENST00000570756 LINC00173Q6ZV60 143 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms