RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 STAB2Q8WWQ8 2551 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 CEBPZOSA8MTT3 80 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 OR11H12B2RN74 326 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 OPRK1P41145 380 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 CCR6P51684 374 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 SMCO1Q147U7 214 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 HAGHQ16775 308 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
CNOT1-220ENST00000569916 DEFB125Q8N687 156 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 SLC24A4Q8NFF2 622 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 OR52B4Q8NGK2 314 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 TMEM170AQ8WVE7 144 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 ZMAT4Q9H898 229 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 HEYLQ9NQ87 328 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-220ENST00000569916 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
CNOT1-220ENST00000569916 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 DUXBA0A1W2PPF3 345 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 TSPAN4O14817 238 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 YIF1AO95070 293 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 TMEM50AO95807 157 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 VAMP1P23763 118 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 TNFRSF9Q07011 255 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 PPP1R1AQ13522 171 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 RBMS2Q15434 407 aaKnown RBP9.75□□□□□ -0.85
CNOT1-220ENST00000569916 MLANAQ16655 118 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 C2orf83Q53S99 150 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 TRIQKQ629K1 86 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 SLC16A13Q7RTY0 426 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 CENPSQ8N2Z9 138 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 LRTM2Q8N967 370 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 SPAG8Q99932 426 aaPredicted RBP9.75□□□□□ -0.85
CNOT1-220ENST00000569916 SRD5A3Q9H8P0 318 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 ZFAND3Q9H8U3 227 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 CACFD1Q9UGQ2 172 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 SMPXQ9UHP9 88 aa9.75□□□□□ -0.85
CNOT1-220ENST00000569916 PIGBOS1A0A0B4J2F0 54 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 RBMY1BA6NDE4 496 aaKnown RBP9.74□□□□□ -0.85
CNOT1-220ENST00000569916 RBMY1EA6NEQ0 496 aaKnown RBP9.74□□□□□ -0.85
CNOT1-220ENST00000569916 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 CLN5O75503 358 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 SFT2D2O95562 160 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 RBMY1DP0C7P1 496 aaKnown RBP9.74□□□□□ -0.85
CNOT1-220ENST00000569916 INPP1P49441 399 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 TOMM20LQ6UXN7 152 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 ZNF600Q6ZNG1 722 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 TMEM116Q8NCL8 245 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 OR4X1Q8NH49 305 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 RBKSQ9H477 322 aa9.74□□□□□ -0.85
CNOT1-220ENST00000569916 PUS1Q9Y606 427 aaKnown RBP eCLIP9.74□□□□□ -0.85
CNOT1-220ENST00000569916 IGHV3-49A0A0A0MS15 119 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 A0A1B0GU03 582 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 CHEK1O14757 476 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 PITX3O75364 302 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 NDUFB6O95139 128 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 IL7P13232 177 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 NPY1RP25929 384 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 BTCP35070 178 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 LAMTOR1Q6IAA8 161 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 OR1S1Q8NH92 325 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 RNASEH2CQ8TDP1 164 aaKnown RBP9.73□□□□□ -0.85
CNOT1-220ENST00000569916 DTD1Q8TEA8 209 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 RNF2Q99496 336 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 RHPN1-AS1Q9BWJ2 59 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 HIPK2Q9H2X6 1198 aa9.73□□□□□ -0.85
CNOT1-220ENST00000569916 DNAH7Q8WXX0 4024 aa9.72□□□□□ -0.85
CNOT1-220ENST00000569916 TRAV14DV4A0A0A6YYC5 116 aa9.72□□□□□ -0.85
CNOT1-220ENST00000569916 LINC00854A0A1B0GVQ3 168 aa9.72□□□□□ -0.85
CNOT1-220ENST00000569916 IGKV1-17P01599 117 aa9.72□□□□□ -0.85
CNOT1-220ENST00000569916 UBE2MP61081 183 aaKnown RBP9.72□□□□□ -0.85
CNOT1-220ENST00000569916 PRSS54Q6PEW0 395 aa9.72□□□□□ -0.85
CNOT1-220ENST00000569916 CITED4Q96RK1 184 aa9.72□□□□□ -0.85
CNOT1-220ENST00000569916 FLVCR2Q9UPI3 526 aa9.72□□□□□ -0.85
CNOT1-220ENST00000569916 IGHV3OR16-13A0A075B7E8 117 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 IGHV3-74A0A0B4J1X5 117 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 APOHP02749 345 aaPredicted RBP9.71□□□□□ -0.86
CNOT1-220ENST00000569916 SLC25A4P12235 298 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 SLC25A6P12236 298 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 RND2P52198 227 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 ODF3L2Q3SX64 289 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 TIGITQ495A1 244 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 ST8SIA2Q92186 375 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 C7orf50Q9BRJ6 194 aaKnown RBP9.71□□□□□ -0.86
CNOT1-220ENST00000569916 VSIRQ9H7M9 311 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 RETNQ9HD89 108 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 UBQLN2Q9UHD9 624 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 TMED3Q9Y3Q3 217 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 U3KQ87 197 aa9.71□□□□□ -0.86
CNOT1-220ENST00000569916 TRAV30A0A087WSZ9 112 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 C9orf170A2RU37 121 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 OR4C46A6NHA9 309 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 SCGB2A1O75556 95 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 IFNA10P01566 189 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 IGLC1P0CG04 106 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 FAM90A2PQ658T7 463 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms