RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 M0R2Z0 102 aa16.73■□□□□ 0.27
SCRT1-201ENST00000569446 LMO1P25800 156 aa16.73■□□□□ 0.27
SCRT1-201ENST00000569446 C22orf34Q6ZV56 151 aa16.73■□□□□ 0.27
SCRT1-201ENST00000569446 TBL2Q9Y4P3 447 aaKnown RBP16.73■□□□□ 0.27
SCRT1-201ENST00000569446 PMCHL1Q16048 86 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 C21orf62-AS1Q17RA5 79 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 LYPD2Q6UXB3 125 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 C1orf229Q6ZS94 237 aaPredicted RBP16.72■□□□□ 0.27
SCRT1-201ENST00000569446 LINC00305Q7Z4B0 112 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 TNFRSF19Q9NS68 423 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 SELENOKQ9Y6D0 94 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 TEX50A0A1B0GTY4 177 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 TDRG1Q3Y452 100 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 PTPN13Q12923 2485 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 LCN12Q6JVE5 192 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 PGLYRP4Q96LB8 373 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 IL36BQ9NZH7 164 aa16.72■□□□□ 0.27
SCRT1-201ENST00000569446 DMXL1Q9Y485 3027 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 M0QZ24 198 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 CT45A6P0DMU7 189 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 CT45A5P0DMU8 189 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 CT45A7P0DMV0 189 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 BRS3P32247 399 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 CDKN1AP38936 164 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 HNRNPA3P51991 378 aaKnown RBP16.71■□□□□ 0.27
SCRT1-201ENST00000569446 PRNTQ86SH4 94 aa16.71■□□□□ 0.27
SCRT1-201ENST00000569446 TCF24Q7RTU0 167 aa16.71■□□□□ 0.26
SCRT1-201ENST00000569446 MCRIP2Q9BUT9 160 aaKnown RBP16.71■□□□□ 0.26
SCRT1-201ENST00000569446 NOL4LQ96MY1 436 aaPredicted RBP16.7■□□□□ 0.26
SCRT1-201ENST00000569446 PMCHL2Q9BQD1 86 aa16.7■□□□□ 0.26
SCRT1-201ENST00000569446 GBGT1Q8N5D6 347 aa16.7■□□□□ 0.26
SCRT1-201ENST00000569446 NEU1Q99519 415 aa16.7■□□□□ 0.26
SCRT1-201ENST00000569446 FBXL15Q9H469 300 aa16.7■□□□□ 0.26
SCRT1-201ENST00000569446 TACC2O95359 2948 aa16.7■□□□□ 0.26
SCRT1-201ENST00000569446 TNRC6AQ8NDV7 1962 aaKnown RBP16.7■□□□□ 0.26
SCRT1-201ENST00000569446 PMS2P5A8MQ11 134 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 IGHV3-23P01764 117 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 HINT1P49773 126 aaPredicted RBP16.69■□□□□ 0.26
SCRT1-201ENST00000569446 MMDQ15546 238 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 DYSFO75923 2080 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 FAM87AP0C7U9 286 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 ARF6P62330 175 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 LCN2P80188 198 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 ACTL10Q5JWF8 245 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 DMRTC2Q8IXT2 367 aaPredicted RBP16.69■□□□□ 0.26
SCRT1-201ENST00000569446 LOXL4Q96JB6 756 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 LPAR2Q9HBW0 351 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 COL8A1P27658 744 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 NGBQ9NPG2 151 aa16.69■□□□□ 0.26
SCRT1-201ENST00000569446 IGHV3OR16-13A0A075B7E8 117 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 IGHV3-74A0A0B4J1X5 117 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 UPK2O00526 184 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 SSBP2P81877 361 aaPredicted RBP16.68■□□□□ 0.26
SCRT1-201ENST00000569446 GNB4Q9HAV0 340 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 DKK4Q9UBT3 224 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 TRAV8-1A0A0A6YYK1 113 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 VDAC2P45880 294 aaPredicted RBP16.68■□□□□ 0.26
SCRT1-201ENST00000569446 C17orf58Q2M2W7 97 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 ZCCHC14Q8WYQ9 949 aaKnown RBP16.68■□□□□ 0.26
SCRT1-201ENST00000569446 GGCTO75223 188 aaKnown RBP16.68■□□□□ 0.26
SCRT1-201ENST00000569446 PRR7Q8TB68 274 aa16.68■□□□□ 0.26
SCRT1-201ENST00000569446 LOXL3P58215 753 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 PRR30Q53SZ7 412 aaPredicted RBP16.67■□□□□ 0.26
SCRT1-201ENST00000569446 NDUFAF3Q9BU61 184 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 TPSG1Q9NRR2 321 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 TLN2Q9Y4G6 2542 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 TMEM144Q7Z5S9 345 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 C1orf162Q8NEQ5 155 aaPredicted RBP16.67■□□□□ 0.26
SCRT1-201ENST00000569446 SLC25A33Q9BSK2 321 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 WNT2P09544 360 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 SPATA45Q537H7 98 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 MORN5Q5VZ52 161 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 OR4C13Q8NGP0 309 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 TMEM106BQ9NUM4 274 aa16.67■□□□□ 0.26
SCRT1-201ENST00000569446 IGHG3P01860 377 aa16.66■□□□□ 0.26
SCRT1-201ENST00000569446 YPEL4Q96NS1 127 aa16.66■□□□□ 0.26
SCRT1-201ENST00000569446 ZNF430Q9H8G1 570 aaPredicted RBP16.66■□□□□ 0.26
SCRT1-201ENST00000569446 K7EN84 100 aa16.66■□□□□ 0.26
SCRT1-201ENST00000569446 RPL27AP46776 148 aaKnown RBP16.66■□□□□ 0.26
SCRT1-201ENST00000569446 MBNL2Q5VZF2 373 aaKnown RBP16.66■□□□□ 0.26
SCRT1-201ENST00000569446 A0A1W2PN81 502 aa16.66■□□□□ 0.26
SCRT1-201ENST00000569446 DLL1O00548 723 aa16.66■□□□□ 0.26
SCRT1-201ENST00000569446 KLF17Q5JT82 389 aaPredicted RBP16.66■□□□□ 0.26
SCRT1-201ENST00000569446 GAFA1Q96PS6 74 aa16.66■□□□□ 0.26
SCRT1-201ENST00000569446 RPUSD1Q9UJJ7 312 aaKnown RBP16.66■□□□□ 0.26
SCRT1-201ENST00000569446 USP9YO00507 2555 aaPredicted RBP16.65■□□□□ 0.26
SCRT1-201ENST00000569446 SNAI2O43623 268 aa16.65■□□□□ 0.26
SCRT1-201ENST00000569446 P01737 135 aa16.65■□□□□ 0.26
SCRT1-201ENST00000569446 LOC389332A0A1B0GUA5 103 aa16.65■□□□□ 0.26
SCRT1-201ENST00000569446 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
SCRT1-201ENST00000569446 C17orf100A8MU93 164 aa16.65■□□□□ 0.26
SCRT1-201ENST00000569446 TMEM177Q53S58 311 aa16.65■□□□□ 0.26
SCRT1-201ENST00000569446 TMEM200BQ69YZ2 307 aa16.65■□□□□ 0.26
SCRT1-201ENST00000569446 ISLRO14498 428 aa16.64■□□□□ 0.26
SCRT1-201ENST00000569446 GOLT1AQ6ZVE7 132 aa16.64■□□□□ 0.26
SCRT1-201ENST00000569446 OR5R1Q8NH85 324 aa16.64■□□□□ 0.26
SCRT1-201ENST00000569446 VSTM2AQ8TAG5 236 aa16.64■□□□□ 0.26
SCRT1-201ENST00000569446 A8MWP6 167 aa16.64■□□□□ 0.25
SCRT1-201ENST00000569446 HSBP1L1C9JCN9 74 aa16.64■□□□□ 0.25
SCRT1-201ENST00000569446 CNTFRP26992 372 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms