RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LOC102724200A0A096LPH7 203 aaPredicted RBP5.79□□□□□ -1.48
CDH3-209ENST00000569080 IGHV3-49A0A0A0MS15 119 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 LCE6AA0A183 80 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 A0A1B0GU03 582 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 CORTO00230 105 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 GNG7O60262 68 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 IFNA17P01571 189 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 IGKV1-17P01599 117 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 APOHP02749 345 aaPredicted RBP5.79□□□□□ -1.48
CDH3-209ENST00000569080 SNCAP37840 140 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 HOXA1P49639 335 aaPredicted RBP5.79□□□□□ -1.48
CDH3-209ENST00000569080 SPCS3P61009 180 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 TMEM187Q14656 261 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 NMSQ5H8A3 153 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 TMEM268Q5VZI3 342 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 LILRB2Q8N423 598 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 TMEM116Q8NCL8 245 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 MCFD2Q8NI22 146 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 ST8SIA2Q92186 375 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 IL22RA2Q969J5 263 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 GPR146Q96CH1 333 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 OVOL2Q9BRP0 275 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 RHPN1-AS1Q9BWJ2 59 aa5.79□□□□□ -1.48
CDH3-209ENST00000569080 PUS1Q9Y606 427 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDH3-209ENST00000569080 IGHV3OR16-13A0A075B7E8 117 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 IGHV3-74A0A0B4J1X5 117 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 FABP12A6NFH5 140 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 OR4C46A6NHA9 309 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 NOL3O60936 208 aaKnown RBP5.78□□□□□ -1.48
CDH3-209ENST00000569080 CLN5O75503 358 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 YIF1AO95070 293 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 TMEM50AO95807 157 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 NPBWR1P48145 328 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 DHODHQ02127 395 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 MLANAQ16655 118 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 C2orf83Q53S99 150 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 LAMTOR1Q6IAA8 161 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 ZNF600Q6ZNG1 722 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 CCDC190Q86UF4 302 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 WFDC3Q8IUB2 231 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 DUSP18Q8NEJ0 188 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 OR4X1Q8NH49 305 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 RNASE11Q8TAA1 199 aaKnown RBP5.78□□□□□ -1.48
CDH3-209ENST00000569080 PDCD10Q9BUL8 212 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 MAP6D1Q9H9H5 199 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.78□□□□□ -1.48
CDH3-209ENST00000569080 TP53TG1Q9Y2A0 90 aa5.78□□□□□ -1.48
CDH3-209ENST00000569080 TRAV14DV4A0A0A6YYC5 116 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 A0A0B4J2A0 478 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 KIR2DL5BA0A0G2JN68 375 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 KIR2DL5BA0A0G2JPC4 375 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 NXPH3O95157 252 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 IGLC1P0CG04 106 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 OPRK1P41145 380 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 HTR2BP41595 481 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 EWSR1Q01844 656 aaKnown RBP eCLIP5.77□□□□□ -1.49
CDH3-209ENST00000569080 ZNF124Q15973 351 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 DEFB135Q30KP9 77 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 PRSS54Q6PEW0 395 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 Q6ZWC4 215 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 APRG1Q8IVJ8 170 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 KIR2DL5AQ8N109 375 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 FAM24BQ8N5W8 94 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 SLC24A4Q8NFF2 622 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 KIR2DL5BQ8NHK3 375 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 GINS3Q9BRX5 216 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 MCUBQ9NWR8 336 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 HSPB7Q9UBY9 170 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 SHPKQ9UHJ6 478 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 SCP2D1Q9UJQ7 156 aa5.77□□□□□ -1.49
CDH3-209ENST00000569080 KMT2AQ03164 3969 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 TRAV2A0A0B4J234 112 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 IGHV3-66A0A0C4DH42 116 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 ZNF701M0R085 212 aaPredicted RBP5.76□□□□□ -1.49
CDH3-209ENST00000569080 SULT1A3P0DMM9 295 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 SULT1A4P0DMN0 295 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 NPY1RP25929 384 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 CRYBB3P26998 211 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 SUB1P53999 127 aaKnown RBP eCLIP5.76□□□□□ -1.49
CDH3-209ENST00000569080 APOC4P55056 127 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 TNFRSF9Q07011 255 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 TIGITQ495A1 244 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 TCF24Q7RTU0 167 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 LYZL2Q7Z4W2 148 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 RNASEH2CQ8TDP1 164 aaKnown RBP5.76□□□□□ -1.49
CDH3-209ENST00000569080 SRRQ9GZT4 340 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 MS4A6AQ9H2W1 248 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 ENY2Q9NPA8 101 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 U3KQE9 123 aa5.76□□□□□ -1.49
CDH3-209ENST00000569080 IGKV3-7A0A075B6H7 116 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 RPS10-NUDT3A0A1W2PQS6 291 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 CEBPZOSA8MTT3 80 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 UBE2CO00762 179 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 PITX3O75364 302 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 DFFBO76075 338 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 SLC25A4P12235 298 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 RPL35AP18077 110 aaKnown RBP5.75□□□□□ -1.49
CDH3-209ENST00000569080 TFPI2P48307 235 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 CCR6P51684 374 aa5.75□□□□□ -1.49
CDH3-209ENST00000569080 RND2P52198 227 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms