RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 FNDC4Q9H6D8 234 aaPredicted RBP15.03■□□□□ -0
ABCA3-206ENST00000569062 MRPL36Q9P0J6 103 aaKnown RBP15.03■□□□□ -0
ABCA3-206ENST00000569062 KCNIP3Q9Y2W7 256 aa15.03■□□□□ -0
ABCA3-206ENST00000569062 IGHV7-4-1A0A0J9YVY3 117 aa15.02■□□□□ -0
ABCA3-206ENST00000569062 NXPH3O95157 252 aa15.02■□□□□ -0
ABCA3-206ENST00000569062 S100A5P33763 92 aa15.02■□□□□ -0
ABCA3-206ENST00000569062 NPBWR1P48145 328 aa15.02■□□□□ -0
ABCA3-206ENST00000569062 SUPT4H1P63272 117 aaKnown RBP15.02■□□□□ -0
ABCA3-206ENST00000569062 RNF2Q99496 336 aa15.02■□□□□ -0
ABCA3-206ENST00000569062 UBQLN2Q9UHD9 624 aa15.02■□□□□ -0
ABCA3-206ENST00000569062 CORTO00230 105 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 CHEK1O14757 476 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 TMEM50AO95807 157 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 OPRK1P41145 380 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 TOMM20LQ6UXN7 152 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 CCDC190Q86UF4 302 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 TOMM5Q8N4H5 51 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 TMEM116Q8NCL8 245 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 IL22RA2Q969J5 263 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 RHPN1-AS1Q9BWJ2 59 aa15.01□□□□□ -0.01
ABCA3-206ENST00000569062 IGHV3OR16-13A0A075B7E8 117 aa15□□□□□ -0.01
ABCA3-206ENST00000569062 TRAV14DV4A0A0A6YYC5 116 aa15□□□□□ -0.01
ABCA3-206ENST00000569062 IGHV3-74A0A0B4J1X5 117 aa15□□□□□ -0.01
ABCA3-206ENST00000569062 FAUP35544 74 aaKnown RBP15□□□□□ -0.01
ABCA3-206ENST00000569062 HEYLQ9NQ87 328 aaPredicted RBP15□□□□□ -0.01
ABCA3-206ENST00000569062 STARD9Q9P2P6 4700 aa15□□□□□ -0.01
ABCA3-206ENST00000569062 CEBPZOSA8MTT3 80 aa14.99□□□□□ -0.01
ABCA3-206ENST00000569062 LYL1P12980 280 aa14.99□□□□□ -0.01
ABCA3-206ENST00000569062 HTR2BP41595 481 aa14.99□□□□□ -0.01
ABCA3-206ENST00000569062 ZNF600Q6ZNG1 722 aa14.99□□□□□ -0.01
ABCA3-206ENST00000569062 LYZL2Q7Z4W2 148 aa14.99□□□□□ -0.01
ABCA3-206ENST00000569062 ZFAND3Q9H8U3 227 aa14.99□□□□□ -0.01
ABCA3-206ENST00000569062 PUS1Q9Y606 427 aaKnown RBP eCLIP14.99□□□□□ -0.01
ABCA3-206ENST00000569062 LOC102724200A0A096LPH7 203 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-206ENST00000569062 A0A1B0GU03 582 aa14.98□□□□□ -0.01
ABCA3-206ENST00000569062 ZNF701M0R085 212 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-206ENST00000569062 CLN5O75503 358 aa14.98□□□□□ -0.01
ABCA3-206ENST00000569062 APOHP02749 345 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-206ENST00000569062 SULT1A3P0DMM9 295 aa14.98□□□□□ -0.01
ABCA3-206ENST00000569062 SULT1A4P0DMN0 295 aa14.98□□□□□ -0.01
ABCA3-206ENST00000569062 AP3S2P59780 193 aa14.98□□□□□ -0.01
ABCA3-206ENST00000569062 ODF3L2Q3SX64 289 aa14.98□□□□□ -0.01
ABCA3-206ENST00000569062 GGTLC1Q9BX51 225 aa14.98□□□□□ -0.01
ABCA3-206ENST00000569062 IGKV3-7A0A075B6H7 116 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 A0A0B4J2A0 478 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 OR4C46A6NHA9 309 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 C2orf83Q53S99 150 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 NMSQ5H8A3 153 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 ZFAND6Q6FIF0 208 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 TMED4Q7Z7H5 227 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 SLC24A4Q8NFF2 622 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 OR4X1Q8NH49 305 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 TMEM170AQ8WVE7 144 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 GINS3Q9BRX5 216 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 SHPKQ9UHJ6 478 aa14.97□□□□□ -0.01
ABCA3-206ENST00000569062 ANXA3P12429 323 aa14.96□□□□□ -0.01
ABCA3-206ENST00000569062 FAM90A2PQ658T7 463 aa14.96□□□□□ -0.01
ABCA3-206ENST00000569062 LGI3Q8N145 548 aa14.96□□□□□ -0.01
ABCA3-206ENST00000569062 LILRB2Q8N423 598 aa14.96□□□□□ -0.01
ABCA3-206ENST00000569062 ST8SIA2Q92186 375 aa14.96□□□□□ -0.01
ABCA3-206ENST00000569062 IGHV3-66A0A0C4DH42 116 aa14.95□□□□□ -0.02
ABCA3-206ENST00000569062 TFPI2P48307 235 aa14.95□□□□□ -0.02
ABCA3-206ENST00000569062 CCR6P51684 374 aa14.95□□□□□ -0.02
ABCA3-206ENST00000569062 SMCO1Q147U7 214 aa14.95□□□□□ -0.02
ABCA3-206ENST00000569062 SRRQ9GZT4 340 aa14.95□□□□□ -0.02
ABCA3-206ENST00000569062 VSIRQ9H7M9 311 aa14.95□□□□□ -0.02
ABCA3-206ENST00000569062 TNFRSF9Q07011 255 aa14.94□□□□□ -0.02
ABCA3-206ENST00000569062 TIGITQ495A1 244 aa14.94□□□□□ -0.02
ABCA3-206ENST00000569062 TMEM128Q5BJH2 165 aa14.94□□□□□ -0.02
ABCA3-206ENST00000569062 SPANXN2Q5MJ10 180 aa14.94□□□□□ -0.02
ABCA3-206ENST00000569062 TCF24Q7RTU0 167 aa14.94□□□□□ -0.02
ABCA3-206ENST00000569062 GBGT1Q8N5D6 347 aa14.94□□□□□ -0.02
ABCA3-206ENST00000569062 HSPB7Q9UBY9 170 aa14.94□□□□□ -0.02
ABCA3-206ENST00000569062 DYNC2H1Q8NCM8 4307 aaKnown RBP14.93□□□□□ -0.02
ABCA3-206ENST00000569062 RPS10-NUDT3A0A1W2PQS6 291 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 IGKV1-17P01599 117 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 NPY1RP25929 384 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 SRPXP78539 464 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 ZNF124Q15973 351 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 PRSS54Q6PEW0 395 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 APRG1Q8IVJ8 170 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 RNASEH2CQ8TDP1 164 aaKnown RBP14.93□□□□□ -0.02
ABCA3-206ENST00000569062 DEDD2Q8WXF8 326 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 LYSTQ99698 3801 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 SLC25A21Q9BQT8 299 aaPredicted RBP14.93□□□□□ -0.02
ABCA3-206ENST00000569062 OVOL2Q9BRP0 275 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 RBKSQ9H477 322 aa14.93□□□□□ -0.02
ABCA3-206ENST00000569062 DFFBO76075 338 aa14.92□□□□□ -0.02
ABCA3-206ENST00000569062 VAMP1P23763 118 aa14.92□□□□□ -0.02
ABCA3-206ENST00000569062 RND2P52198 227 aa14.92□□□□□ -0.02
ABCA3-206ENST00000569062 BAK1Q16611 211 aa14.92□□□□□ -0.02
ABCA3-206ENST00000569062 DTD1Q8TEA8 209 aa14.92□□□□□ -0.02
ABCA3-206ENST00000569062 CACFD1Q9UGQ2 172 aa14.92□□□□□ -0.02
ABCA3-206ENST00000569062 TRAV30A0A087WSZ9 112 aa14.91□□□□□ -0.02
ABCA3-206ENST00000569062 IFNA10P01566 189 aa14.91□□□□□ -0.02
ABCA3-206ENST00000569062 IGLC1P0CG04 106 aa14.91□□□□□ -0.02
ABCA3-206ENST00000569062 SLC25A4P12235 298 aa14.91□□□□□ -0.02
ABCA3-206ENST00000569062 BMI1P35226 326 aa14.91□□□□□ -0.02
ABCA3-206ENST00000569062 OR1S1Q8NH92 325 aa14.91□□□□□ -0.02
ABCA3-206ENST00000569062 SCGB2A1O75556 95 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms