RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	ZFP36	P26651	326 aa	Known RBP	10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST1H2BB	P33778	126 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	SUB1	P53999	127 aa	Known RBP eCLIP	10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST1H2BD	P58876	126 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	RHOB	P62745	196 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST1H2BC	P62807	126 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST2H2BE	Q16778	126 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST1H2BH	Q93079	126 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	SLC35E1	Q96K37	410 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST1H2BN	Q99877	126 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST1H2BM	Q99879	126 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	SMIM7	Q9BQ49	75 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494	NAT8	Q9UHE5	227 aa		10.65	□□□□□ -0.71
ZNRF1-208	ENST00000568494		A0A1W2PRD5	423 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494		A0A1W2PRF3	423 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494		A0A1W2PRM7	423 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	IGLC7	A0M8Q6	106 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	IFITM10	A6NMD0	228 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	NDUFS6	O75380	124 aa	Known RBP	10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ACTL6B	O94805	426 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	TRGC2	P03986	189 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	COX6B1	P14854	86 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	NPPC	P23582	126 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PRTN3	P24158	256 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HTR1D	P28221	377 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	RPL27A	P46776	148 aa	Known RBP	10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ATP5G3	P48201	142 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	EFNA4	P52798	201 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	GNB1	P62873	340 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	SSBP2	P81877	361 aa	Predicted RBP	10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	TMEM241	Q24JQ0	296 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	CST9LP1	Q5W188	147 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	MIR17HG	Q75NE6	70 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	LHFPL4	Q7Z7J7	247 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ACY3	Q96HD9	319 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PARL	Q9H300	379 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	FBXL15	Q9H469	300 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	DPM3	Q9P2X0	92 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HILPDA	Q9Y5L2	63 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ARHGAP32	A7KAX9	2087 aa		10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ASH1L	Q9NR48	2969 aa	Known RBP	10.64	□□□□□ -0.71
ZNRF1-208	ENST00000568494	CSMD1	Q96PZ7	3565 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	TIMM23	O14925	209 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	IGHV3-48	P01763	117 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	S100A2	P29034	98 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	GCHFR	P30047	84 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	CYP2G1P	Q6ZSU1	146 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	VPS13C	Q709C8	3753 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	TRBV24-1	A0A075B6N3	115 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ODF3B	A8MYP8	253 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	FCN1	O00602	326 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	APELA	P0DMC3	54 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	AREG	P15514	252 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	COMP	P49747	757 aa	Predicted RBP	10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	FAM78B	Q5VT40	261 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	C19orf35	Q6ZS72	473 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PPP1R27	Q86WC6	154 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	RNF5	Q99942	180 aa		10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	GAR1	Q9NY12	217 aa	Known RBP	10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	MRPL36	Q9P0J6	103 aa	Known RBP	10.63	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	VENTX	O95231	258 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	MFAP2	P55001	183 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	NPIPB3	Q92617	1050 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	SSX3	Q99909	188 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	FUT9	Q9Y231	359 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	TRGC1	P0CF51	173 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	RPL23	P62829	140 aa	Known RBP	10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ADIRF	Q15847	76 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PVRIG	Q6DKI7	326 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	VMO1	Q7Z5L0	202 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	OR51G1	Q8NGK1	321 aa		10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.62	□□□□□ -0.71
ZNRF1-208	ENST00000568494	TEX22	C9J3V5	150 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PPP1R2P9	O14990	202 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PDE6D	O43924	150 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	LCN2	P80188	198 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	RUSC1-AS1	Q66K80	236 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	C1orf122	Q6ZSJ8	110 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	MRPL41	Q8IXM3	137 aa	Known RBP	10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	CFHR4	Q92496	578 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	FRZB	Q92765	325 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	MISP3	Q96FF7	219 aa		10.61	□□□□□ -0.71
ZNRF1-208	ENST00000568494	IGKV1D-37	A0A075B6S9	117 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	CD24	P25063	80 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	CEACAM3	P40198	252 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	C16orf82	Q7Z2V1	217 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	HIST3H2BB	Q8N257	126 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	KIR3DL3	Q8N743	410 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	ZNF114	Q8NC26	417 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	TMEM37	Q8WXS4	190 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PLXNB1	O43157	2135 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494		F6UZH7	168 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	OVOL3	O00110	214 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	PHOX2A	O14813	284 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	NDUFB4	O95168	129 aa		10.6	□□□□□ -0.71
ZNRF1-208	ENST00000568494	OR5G3	P0C626	314 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms