RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 PPP1R1AQ13522 171 aa18.92■□□□□ 0.62
FANCA-228ENST00000567943 ANKRD55Q3KP44 614 aa18.92■□□□□ 0.62
FANCA-228ENST00000567943 TMEM61Q8N0U2 210 aa18.92■□□□□ 0.62
FANCA-228ENST00000567943 CACFD1Q9UGQ2 172 aa18.92■□□□□ 0.62
FANCA-228ENST00000567943 PIGBOS1A0A0B4J2F0 54 aa18.91■□□□□ 0.62
FANCA-228ENST00000567943 ZNF207O43670 478 aaKnown RBP18.91■□□□□ 0.62
FANCA-228ENST00000567943 SFT2D2O95562 160 aa18.91■□□□□ 0.62
FANCA-228ENST00000567943 CD7P09564 240 aa18.91■□□□□ 0.62
FANCA-228ENST00000567943 OPRK1P41145 380 aa18.91■□□□□ 0.62
FANCA-228ENST00000567943 CD81P60033 236 aa18.91■□□□□ 0.62
FANCA-228ENST00000567943 RYR3Q15413 4870 aa18.91■□□□□ 0.62
FANCA-228ENST00000567943 CENPXA8MT69 81 aa18.9■□□□□ 0.62
FANCA-228ENST00000567943 YIF1AO95070 293 aa18.9■□□□□ 0.62
FANCA-228ENST00000567943 NDUFB6O95139 128 aa18.9■□□□□ 0.62
FANCA-228ENST00000567943 NEURL2Q9BR09 285 aa18.9■□□□□ 0.62
FANCA-228ENST00000567943 FNDC4Q9H6D8 234 aaPredicted RBP18.9■□□□□ 0.62
FANCA-228ENST00000567943 CSMD3Q7Z407 3707 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 A0A1B0GU03 582 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 DUXBA0A1W2PPF3 345 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 SCAF4O95104 1147 aaKnown RBP18.89■□□□□ 0.61
FANCA-228ENST00000567943 TNFRSF9Q07011 255 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 MLANAQ16655 118 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 LRTM2Q8N967 370 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 SLC24A4Q8NFF2 622 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 OR1S1Q8NH92 325 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 C7orf50Q9BRJ6 194 aaKnown RBP18.89■□□□□ 0.61
FANCA-228ENST00000567943 WFDC10AQ9H1F0 79 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 HIPK2Q9H2X6 1198 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 HSPB7Q9UBY9 170 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 FLVCR2Q9UPI3 526 aa18.89■□□□□ 0.61
FANCA-228ENST00000567943 C15orf62A8K5M9 175 aa18.88■□□□□ 0.61
FANCA-228ENST00000567943 K7EMT4 169 aa18.88■□□□□ 0.61
FANCA-228ENST00000567943 HAGHQ16775 308 aa18.88■□□□□ 0.61
FANCA-228ENST00000567943 C2orf83Q53S99 150 aa18.88■□□□□ 0.61
FANCA-228ENST00000567943 LINC00322Q6ZN03 302 aaPredicted RBP18.88■□□□□ 0.61
FANCA-228ENST00000567943 MRPL36Q9P0J6 103 aaKnown RBP18.88■□□□□ 0.61
FANCA-228ENST00000567943 TMEM50AO95807 157 aa18.87■□□□□ 0.61
FANCA-228ENST00000567943 BTCP35070 178 aa18.87■□□□□ 0.61
FANCA-228ENST00000567943 UBE2MP61081 183 aaKnown RBP18.87■□□□□ 0.61
FANCA-228ENST00000567943 RBPMS2Q6ZRY4 209 aaKnown RBP18.87■□□□□ 0.61
FANCA-228ENST00000567943 RBKSQ9H477 322 aa18.87■□□□□ 0.61
FANCA-228ENST00000567943 TUBA4BQ9H853 241 aa18.87■□□□□ 0.61
FANCA-228ENST00000567943 ZMAT4Q9H898 229 aa18.87■□□□□ 0.61
FANCA-228ENST00000567943 DYNC2H1Q8NCM8 4307 aaKnown RBP18.86■□□□□ 0.61
FANCA-228ENST00000567943 TRAV25A0A0B4J276 109 aa18.86■□□□□ 0.61
FANCA-228ENST00000567943 NPY1RP25929 384 aa18.86■□□□□ 0.61
FANCA-228ENST00000567943 CNPY1Q3B7I2 92 aa18.86■□□□□ 0.61
FANCA-228ENST00000567943 DTD1Q8TEA8 209 aa18.86■□□□□ 0.61
FANCA-228ENST00000567943 TMEM170AQ8WVE7 144 aa18.86■□□□□ 0.61
FANCA-228ENST00000567943 RPS10-NUDT3A0A1W2PQS6 291 aa18.85■□□□□ 0.61
FANCA-228ENST00000567943 A6NHS1 94 aa18.85■□□□□ 0.61
FANCA-228ENST00000567943 CLN5O75503 358 aa18.85■□□□□ 0.61
FANCA-228ENST00000567943 DEFB125Q8N687 156 aa18.85■□□□□ 0.61
FANCA-228ENST00000567943 OR4X1Q8NH49 305 aa18.85■□□□□ 0.61
FANCA-228ENST00000567943 RNASEH2CQ8TDP1 164 aaKnown RBP18.85■□□□□ 0.61
FANCA-228ENST00000567943 OR10C1Q96KK4 312 aa18.85■□□□□ 0.61
FANCA-228ENST00000567943 TMED3Q9Y3Q3 217 aa18.85■□□□□ 0.61
FANCA-228ENST00000567943 C9orf170A2RU37 121 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 PLA2G10O15496 165 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 PITX3O75364 302 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 IFNA10P01566 189 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 HOXB5P09067 269 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 TOMM20LQ6UXN7 152 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 ZNF600Q6ZNG1 722 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 SLC16A13Q7RTY0 426 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 OR52B4Q8NGK2 314 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 SMPXQ9UHP9 88 aa18.84■□□□□ 0.61
FANCA-228ENST00000567943 IGHV3-49A0A0A0MS15 119 aa18.83■□□□□ 0.6
FANCA-228ENST00000567943 IGHV7-4-1A0A0J9YVY3 117 aa18.83■□□□□ 0.6
FANCA-228ENST00000567943 RBMY1BA6NDE4 496 aaKnown RBP18.83■□□□□ 0.6
FANCA-228ENST00000567943 RBMY1EA6NEQ0 496 aaKnown RBP18.83■□□□□ 0.6
FANCA-228ENST00000567943 RBMY1DP0C7P1 496 aaKnown RBP18.83■□□□□ 0.6
FANCA-228ENST00000567943 NOXA1Q86UR1 476 aa18.83■□□□□ 0.6
FANCA-228ENST00000567943 PUS1Q9Y606 427 aaKnown RBP eCLIP18.83■□□□□ 0.6
FANCA-228ENST00000567943 U3KQ87 197 aa18.83■□□□□ 0.6
FANCA-228ENST00000567943 STARD9Q9P2P6 4700 aa18.83■□□□□ 0.6
FANCA-228ENST00000567943 TRAV14DV4A0A0A6YYC5 116 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 OR11H12B2RN74 326 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 OR4E1P0C645 316 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 SLC25A6P12236 298 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 ANXA7P20073 488 aaKnown RBP18.82■□□□□ 0.6
FANCA-228ENST00000567943 LAMTOR1Q6IAA8 161 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 LINC00299Q6ZSB3 139 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 TMEM116Q8NCL8 245 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 RHPN1-AS1Q9BWJ2 59 aa18.82■□□□□ 0.6
FANCA-228ENST00000567943 LYRM1O43325 122 aa18.81■□□□□ 0.6
FANCA-228ENST00000567943 DHRS2Q13268 280 aa18.81■□□□□ 0.6
FANCA-228ENST00000567943 GGNBP1Q5YKI7 109 aa18.81■□□□□ 0.6
FANCA-228ENST00000567943 PRSS54Q6PEW0 395 aa18.81■□□□□ 0.6
FANCA-228ENST00000567943 GINS3Q9BRX5 216 aa18.81■□□□□ 0.6
FANCA-228ENST00000567943 CCDC32Q9BV29 185 aa18.81■□□□□ 0.6
FANCA-228ENST00000567943 CHEK1O14757 476 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 TSPAN4O14817 238 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 SCGB2A1O75556 95 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 SLC25A4P12235 298 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 RND2P52198 227 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 TIGITQ495A1 244 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 C4orf46Q504U0 113 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 LYG2Q86SG7 212 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 COQ8AQ8NI60 647 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms