RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IGHV3-21A0A0B4J1V1 117 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 IGHV7-4-1A0A0J9YVY3 117 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 A0A0J9YWU9 116 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 INMT-MINDY4F8WBC2 141 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 CD74P04233 296 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 TCRBP04435 133 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 CTSGP08311 255 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 BTCP35070 178 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 HSPE1P61604 102 aaKnown RBP13.82□□□□□ -0.2
LINC01238-205ENST00000567549 GATAD1Q8WUU5 269 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 SEC22AQ96IW7 307 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 OR10C1Q96KK4 312 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 RHPN1-AS1Q9BWJ2 59 aa13.82□□□□□ -0.2
LINC01238-205ENST00000567549 SACSQ9NZJ4 4579 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 DISC1C4P0D8 188 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 CD3DP04234 171 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 ADMP35318 185 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 MFAP2P55001 183 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 PMS2P11Q13670 270 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 ODF3L2Q3SX64 289 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 SLC35G3Q8N808 338 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 OR4C16Q8NGL9 310 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 LINC00476Q8WZB0 136 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 MAP6D1Q9H9H5 199 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 SCP2D1Q9UJQ7 156 aa13.81□□□□□ -0.2
LINC01238-205ENST00000567549 B3GALNT1O75752 331 aa13.8□□□□□ -0.2
LINC01238-205ENST00000567549 H2AFB2P0C5Z0 115 aa13.8□□□□□ -0.2
LINC01238-205ENST00000567549 PGAM2P15259 253 aa13.8□□□□□ -0.2
LINC01238-205ENST00000567549 AKR1C2P52895 323 aa13.8□□□□□ -0.2
LINC01238-205ENST00000567549 RNASE10Q5GAN6 216 aaKnown RBP13.8□□□□□ -0.2
LINC01238-205ENST00000567549 CEMP1Q6PRD7 247 aaPredicted RBP13.8□□□□□ -0.2
LINC01238-205ENST00000567549 ARRDC1Q8N5I2 433 aa13.8□□□□□ -0.2
LINC01238-205ENST00000567549 PINX1Q96BK5 328 aaKnown RBP13.8□□□□□ -0.2
LINC01238-205ENST00000567549 SLC25A21Q9BQT8 299 aaPredicted RBP13.8□□□□□ -0.2
LINC01238-205ENST00000567549 MFFQ9GZY8 342 aa13.8□□□□□ -0.2
LINC01238-205ENST00000567549 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
LINC01238-205ENST00000567549 MPTX1A8MV57 137 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 F8W735 103 aaPredicted RBP13.79□□□□□ -0.2
LINC01238-205ENST00000567549 I3L2K1 104 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 CHEK1O14757 476 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 ZNF207O43670 478 aaKnown RBP13.79□□□□□ -0.2
LINC01238-205ENST00000567549 LY6G6CO95867 125 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 MT-CO2P00403 227 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 CCR6P51684 374 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 RND3P61587 244 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 CCDC71LQ8N9Z2 235 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 CHAC2Q8WUX2 184 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 MRGPRFQ96AM1 343 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 NARS2Q96I59 477 aaKnown RBP13.79□□□□□ -0.2
LINC01238-205ENST00000567549 RNF2Q99496 336 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 PRRT1Q99946 306 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 CSTL1Q9H114 145 aa13.79□□□□□ -0.2
LINC01238-205ENST00000567549 A0A1W2PS18 150 aa13.78□□□□□ -0.2
LINC01238-205ENST00000567549 DNASE2O00115 360 aaPredicted RBP13.78□□□□□ -0.2
LINC01238-205ENST00000567549 DFFBO76075 338 aa13.78□□□□□ -0.2
LINC01238-205ENST00000567549 NDUFB6O95139 128 aa13.78□□□□□ -0.2
LINC01238-205ENST00000567549 RPL35AP18077 110 aaKnown RBP13.78□□□□□ -0.2
LINC01238-205ENST00000567549 RBMS2Q15434 407 aaKnown RBP13.78□□□□□ -0.2
LINC01238-205ENST00000567549 ZFAND1Q8TCF1 268 aa13.78□□□□□ -0.2
LINC01238-205ENST00000567549 NUDT15Q9NV35 164 aa13.78□□□□□ -0.2
LINC01238-205ENST00000567549 IGHV3OR16-8A0A075B7F1 116 aa13.77□□□□□ -0.21
LINC01238-205ENST00000567549 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
LINC01238-205ENST00000567549 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
LINC01238-205ENST00000567549 PRAF2O60831 178 aa13.77□□□□□ -0.21
LINC01238-205ENST00000567549 IFNA17P01571 189 aa13.77□□□□□ -0.21
LINC01238-205ENST00000567549 ZNF600Q6ZNG1 722 aa13.77□□□□□ -0.21
LINC01238-205ENST00000567549 OR51S1Q8NGJ8 323 aa13.77□□□□□ -0.21
LINC01238-205ENST00000567549 RNASE11Q8TAA1 199 aaKnown RBP13.77□□□□□ -0.21
LINC01238-205ENST00000567549 RRNAD1Q96FB5 475 aaKnown RBP13.77□□□□□ -0.21
LINC01238-205ENST00000567549 TRAV6A0A075B6T7 132 aa13.76□□□□□ -0.21
LINC01238-205ENST00000567549 M0QYG6 137 aa13.76□□□□□ -0.21
LINC01238-205ENST00000567549 EIF2B2P49770 351 aaKnown RBP13.76□□□□□ -0.21
LINC01238-205ENST00000567549 OR4D10Q8NGI6 311 aa13.76□□□□□ -0.21
LINC01238-205ENST00000567549 C20orf85Q9H1P6 137 aa13.76□□□□□ -0.21
LINC01238-205ENST00000567549 CACFD1Q9UGQ2 172 aa13.76□□□□□ -0.21
LINC01238-205ENST00000567549 DBX1A6NMT0 343 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 ST8SIA3O43173 380 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 IL5P05113 134 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 TFPI2P48307 235 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 HOXA1P49639 335 aaPredicted RBP13.75□□□□□ -0.21
LINC01238-205ENST00000567549 PIGPP57054 158 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 RPL11P62913 178 aaKnown RBP13.75□□□□□ -0.21
LINC01238-205ENST00000567549 TMEM41BQ5BJD5 291 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 TCF24Q7RTU0 167 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 SCGB3A2Q96PL1 93 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 RARRES2Q99969 163 aa13.75□□□□□ -0.21
LINC01238-205ENST00000567549 C3orf85A0A1B0GTC6 90 aa13.74□□□□□ -0.21
LINC01238-205ENST00000567549 IFNA4P05014 189 aa13.74□□□□□ -0.21
LINC01238-205ENST00000567549 FAAP20Q6NZ36 180 aa13.74□□□□□ -0.21
LINC01238-205ENST00000567549 APRG1Q8IVJ8 170 aa13.74□□□□□ -0.21
LINC01238-205ENST00000567549 FAM219AQ8IW50 185 aa13.74□□□□□ -0.21
LINC01238-205ENST00000567549 GRAMD2BQ96HH9 432 aa13.74□□□□□ -0.21
LINC01238-205ENST00000567549 IGKV3-7A0A075B6H7 116 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 TRAV30A0A087WSZ9 112 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 RPS10-NUDT3A0A1W2PQS6 291 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 C7orf66A4D0T2 115 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 IGKV1-39P01597 117 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 IGKV1D-39P04432 117 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 NPPCP23582 126 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 TERB2Q8NHR7 220 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms