RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ZNF833PQ6ZTB9 187 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 DEFB128Q7Z7B8 93 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 LYG2Q86SG7 212 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 Q86TA4 180 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 COMMD7Q86VX2 200 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 OOSP2Q86WS3 158 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 GKN2Q86XP6 184 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PHF13Q86YI8 300 aaPredicted RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CD302Q8IX05 232 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 LINC00301Q8NCQ3 95 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PXT1Q8NFP0 134 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 OR4E2Q8NGC2 313 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 OR52L1Q8NGH7 329 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 OR5L1Q8NGL2 311 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 OR13D1Q8NGV5 346 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 OR5AK3PQ8NH89 298 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 MRPL30Q8TCC3 161 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 DNAJC9Q8WXX5 260 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 H1FXQ92522 213 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TMEM106AQ96A25 262 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 GPR146Q96CH1 333 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CCDC124Q96CT7 223 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SMIM19Q96E16 107 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 MSANTD3Q96H12 275 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 DIRAS2Q96HU8 199 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CNBD2Q96M20 576 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 LINC00052Q96N35 136 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SCGB3A1Q96QR1 104 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TSPAN32Q96QS1 320 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 CCL19Q99731 98 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SIKE1Q9BRV8 207 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 GGACTQ9BVM4 153 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 NDEL1Q9GZM8 345 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 WFDC10AQ9H1F0 79 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PROK2Q9HC23 129 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TREM1Q9NP99 234 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 SPANXB1Q9NS25 103 aaPredicted RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 RASL12Q9NYN1 266 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 IDI2-AS1Q9NZ38 188 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 ERGIC3Q9Y282 383 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PKIGQ9Y2B9 76 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 C15orf41Q9Y2V0 281 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 RBBP6Q7Z6E9 1792 aaKnown RBP-0.2□□□□□ -2.44
CDH1-211ENST00000567320 FANCMQ8IYD8 2048 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 MYO3BQ8WXR4 1341 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 RAD50Q92878 1312 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 HSPG2P98160 4391 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 RFX7Q2KHR2 1363 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 TRPM1Q7Z4N2 1603 aa-0.2□□□□□ -2.44
CDH1-211ENST00000567320 PLXND1Q9Y4D7 1925 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 DCCP43146 1447 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TNS3Q68CZ2 1445 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 KIAA1549Q9HCM3 1950 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 NCOR2Q9Y618 2525 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 LRP2P98164 4655 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 SNAPC4Q5SXM2 1469 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 N4BP2Q86UW6 1770 aaPredicted RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 KIF13BQ9NQT8 1826 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TRAV23DV6A0A075B6W5 121 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 FAM236DA0A1B0GTK5 79 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 EXOC1LA0A1B0GW35 172 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 A0A1W2PRS3 328 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PQLC2LA1A4F0 135 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 C9orf170A2RU37 121 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 FUOMA2VDF0 154 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 FABP12A6NFH5 140 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 DPRXA6NFQ7 191 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TRPC5OSA6NMA1 111 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 C1orf196B1AJZ1 125 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 DISC1C4P0D8 188 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 JMJD7-PLA2G4BH0Y9G9 81 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CXCR6O00574 342 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 NUPR1O60356 82 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 HPGDSO60760 199 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 AHSA1O95433 338 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 C1QBP02746 253 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PRM1P04553 51 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 FAM236CP0DP71 79 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 SPRR2DP22532 72 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 NFYAP23511 347 aaPredicted RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 RPS12P25398 132 aaKnown RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PSMB6P28072 239 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 MAGEA2P43356 314 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 RPL5P46777 297 aaKnown RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 MARCKSL1P49006 195 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CDC34P49427 236 aaPredicted RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 BLVRAP53004 296 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 UBE2G2P60604 165 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 RPL37AP61513 92 aaKnown RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 NAA20P61599 178 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 SNRPD2P62316 118 aaKnown RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 DYNLT1P63172 113 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 HBA1P69905 142 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 DMTNQ08495 405 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 FABP9Q0Z7S8 132 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 MLLT11Q13015 90 aaPredicted RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 STK38Q15208 465 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 GRK1Q15835 563 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ESRGQ1W209 222 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms