RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	SMPX	Q9UHP9	88 aa		10.35	□□□□□ -0.75
PKD1-231	ENST00000566784		A0A0B4J2A0	478 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	IGHV7-4-1	A0A0J9YVY3	117 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	ZNF207	O43670	478 aa	Known RBP	10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	YIF1A	O95070	293 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	AKR1C4	P17516	323 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	HTR2B	P41595	481 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	SUPT4H1	P63272	117 aa	Known RBP	10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	SRPX	P78539	464 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	TMEM116	Q8NCL8	245 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	GINS3	Q9BRX5	216 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	SHPK	Q9UHJ6	478 aa		10.34	□□□□□ -0.75
PKD1-231	ENST00000566784	CSMD3	Q7Z407	3707 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	TRAV14DV4	A0A0A6YYC5	116 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	PIGBOS1	A0A0B4J2F0	54 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	CHEK1	O14757	476 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	TMEM50A	O95807	157 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	SULT1A3	P0DMM9	295 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	SULT1A4	P0DMN0	295 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	ANXA3	P12429	323 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	OPRK1	P41145	380 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	C2orf83	Q53S99	150 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	ZNF600	Q6ZNG1	722 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	OR4X1	Q8NH49	305 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	FAM110A	Q9BQ89	295 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	RHPN1-AS1	Q9BWJ2	59 aa		10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	HEYL	Q9NQ87	328 aa	Predicted RBP	10.33	□□□□□ -0.76
PKD1-231	ENST00000566784	OR4C46	A6NHA9	309 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	CEBPZOS	A8MTT3	80 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	CLN5	O75503	358 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	SCGB2A1	O75556	95 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	BMI1	P35226	326 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	CCR6	P51684	374 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	TMEM128	Q5BJH2	165 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	NMS	Q5H8A3	153 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	SPANXN2	Q5MJ10	180 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	CASC10	Q5T4H9	136 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	TOMM20L	Q6UXN7	152 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	LGI3	Q8N145	548 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	RNF2	Q99496	336 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	GGTLC1	Q9BX51	225 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	ZFAND3	Q9H8U3	227 aa		10.32	□□□□□ -0.76
PKD1-231	ENST00000566784	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	DUXB	A0A1W2PPF3	345 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	CD5	P06127	495 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	LYL1	P12980	280 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	SMCO1	Q147U7	214 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	ODF3L2	Q3SX64	289 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	LYZL2	Q7Z4W2	148 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	SLC24A4	Q8NFF2	622 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	VSIR	Q9H7M9	311 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	RETN	Q9HD89	108 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	PRR13	Q9NZ81	148 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	MRPL36	Q9P0J6	103 aa	Known RBP	10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	HSPB7	Q9UBY9	170 aa		10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
PKD1-231	ENST00000566784	TRAV30	A0A087WSZ9	112 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	SLC25A4	P12235	298 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	TNFRSF9	Q07011	255 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	MLANA	Q16655	118 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	FAM90A2P	Q658T7	463 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	TMED4	Q7Z7H5	227 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	NOXA1	Q86UR1	476 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	SRR	Q9GZT4	340 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	UBQLN2	Q9UHD9	624 aa		10.3	□□□□□ -0.76
PKD1-231	ENST00000566784	IGHV3-49	A0A0A0MS15	119 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784		A0A1B0GU03	582 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784	IGKV1-17	P01599	117 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784	NPY1R	P25929	384 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784	ETFRF1	Q6IPR1	90 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784	PRSS54	Q6PEW0	395 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784	LRTM2	Q8N967	370 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784	TMEM170A	Q8WVE7	144 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784		U3KQ87	197 aa		10.29	□□□□□ -0.76
PKD1-231	ENST00000566784	NXPH3	O95157	252 aa		10.28	□□□□□ -0.76
PKD1-231	ENST00000566784	CMC4	P56277	68 aa	Predicted RBP	10.28	□□□□□ -0.76
PKD1-231	ENST00000566784	ATP5I	P56385	69 aa	Predicted RBP	10.28	□□□□□ -0.76
PKD1-231	ENST00000566784	OR1S2	Q8NGQ3	325 aa		10.28	□□□□□ -0.76
PKD1-231	ENST00000566784	DTD1	Q8TEA8	209 aa		10.28	□□□□□ -0.76
PKD1-231	ENST00000566784	ST8SIA2	Q92186	375 aa		10.28	□□□□□ -0.76
PKD1-231	ENST00000566784	TMEM231	Q9H6L2	316 aa		10.28	□□□□□ -0.76
PKD1-231	ENST00000566784	IGHV3OR16-13	A0A075B7E8	117 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	IGHV3-74	A0A0B4J1X5	117 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784		A0A1W2PS18	150 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	NAP1L6	A6NFF2	107 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	PITX3	O75364	302 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	IFNA10	P01566	189 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	APOH	P02749	345 aa	Predicted RBP	10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	IGLC1	P0CG04	106 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	SLC25A6	P12236	298 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	NPPC	P23582	126 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	VAMP1	P23763	118 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	CRYBB3	P26998	211 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	RND2	P52198	227 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	APOC4	P55056	127 aa		10.27	□□□□□ -0.77
PKD1-231	ENST00000566784	UBE2M	P61081	183 aa	Known RBP	10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms