RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 I3L2K1 104 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 UCP1P25874 307 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 TNFSF8P32971 234 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 SUB1P53999 127 aaKnown RBP eCLIP7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 ELLP55199 621 aaPredicted RBP7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 LAMTOR1Q6IAA8 161 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 TMED4Q7Z7H5 227 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 GBGT1Q8N5D6 347 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 DUSP18Q8NEJ0 188 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 LHFPL5Q8TAF8 219 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 RTBDNQ9BSG5 229 aaPredicted RBP7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 SLIRPQ9GZT3 109 aaKnown RBP7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 TMEM222Q9H0R3 208 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 C5orf66Q9H5L9 145 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 HEYLQ9NQ87 328 aaPredicted RBP7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 GAR1Q9NY12 217 aaKnown RBP7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 SCP2D1Q9UJQ7 156 aa7.57□□□□□ -1.2
GTF3C1-206ENST00000566779 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 ANKRD20A5PA0PJZ0 165 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 OR4C46A6NHA9 309 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 CTDSPLO15194 276 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 CTSGP08311 255 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 RPL35AP18077 110 aaKnown RBP7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 S100A5P33763 92 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 NPBWR1P48145 328 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 SELENOHQ8IZQ5 122 aaKnown RBP7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 ZNF114Q8NC26 417 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 TMEM116Q8NCL8 245 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 RBPMSQ93062 196 aaKnown RBP7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 RNF2Q99496 336 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 SPAG8Q99932 426 aaPredicted RBP7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 GINS3Q9BRX5 216 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 RHPN1-AS1Q9BWJ2 59 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 GGTLC1Q9BX51 225 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 HIPK2Q9H2X6 1198 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 RABL2AQ9UBK7 228 aaPredicted RBP7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
GTF3C1-206ENST00000566779 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 IGHV7-4-1A0A0J9YVY3 117 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 CRYM-AS1A6NIL9 109 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 C15orf62A8K5M9 175 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 GSTZ1O43708 216 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 P0C879 139 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 C8orf88P0DMB2 117 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 RNASE2P10153 161 aaKnown RBP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 FAUP35544 74 aaKnown RBP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 DHODHQ02127 395 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 SURF2Q15527 256 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 Q6ZRM9 215 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 CADM3Q8N126 398 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 TOMM5Q8N4H5 51 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 GLYATL2Q8WU03 294 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 TMEM230Q96A57 120 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 GPR146Q96CH1 333 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 NXF2Q9GZY0 626 aaKnown RBP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 PUS1Q9Y606 427 aaKnown RBP eCLIP7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 AGRNO00468 2067 aa7.55□□□□□ -1.2
GTF3C1-206ENST00000566779 TRAV14DV4A0A0A6YYC5 116 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 CORTO00230 105 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 TSPAN4O14817 238 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 SCGB2A1O75556 95 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 B3GALNT1O75752 331 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 CDS2O95674 445 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 INPP1P49441 399 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 SPCS3P61009 180 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 MLANAQ16655 118 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 DEFB135Q30KP9 77 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 ODF3L2Q3SX64 289 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 TIGITQ495A1 244 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 TCF24Q7RTU0 167 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 APRG1Q8IVJ8 170 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 FAM219AQ8IW50 185 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 SLC24A4Q8NFF2 622 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 ST8SIA2Q92186 375 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 SCGB3A2Q96PL1 93 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 TXN2Q99757 166 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 EDA2RQ9HAV5 297 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 MRPL36Q9P0J6 103 aaKnown RBP7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 SMPXQ9UHP9 88 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 RABAC1Q9UI14 185 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 PAIP2BQ9ULR5 123 aaKnown RBP7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 GPR132Q9UNW8 380 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 KCNIP3Q9Y2W7 256 aa7.54□□□□□ -1.2
GTF3C1-206ENST00000566779 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 LINC00854A0A1B0GVQ3 168 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 RPS10-NUDT3A0A1W2PQS6 291 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 K7EMT4 169 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 DNASE2O00115 360 aaPredicted RBP7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 CHEK1O14757 476 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 IFNA10P01566 189 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 SULT1A3P0DMM9 295 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 SULT1A4P0DMN0 295 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 ANXA3P12429 323 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 BMI1P35226 326 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 RND2P52198 227 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 APOC4P55056 127 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 AP3S2P59780 193 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 ZNF124Q15973 351 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms