RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 AGMATQ9BSE5 352 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 DMRT1Q9Y5R6 373 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 TRBV24-1A0A075B6N3 115 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 F2RL2O00254 374 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 LIPFP07098 398 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 DDTP30046 118 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 BRS3P32247 399 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 ARL3P36405 182 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 TMEM183BQ1AE95 376 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 SLC25A33Q9BSK2 321 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 NDFIP1Q9BT67 221 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 RAXQ9Y2V3 346 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 TMEM178BH3BS89 294 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 CA1P00915 261 aaPredicted RBP9.5□□□□□ -0.89
CDH1-210ENST00000566612 NBEAP1P0C6P0 100 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 DOPEY2Q9Y3R5 2298 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 LCN2P80188 198 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 SMIM15Q7Z3B0 74 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 TMEM133Q9H2Q1 129 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 FOXA2Q9Y261 457 aaPredicted RBP9.5□□□□□ -0.89
CDH1-210ENST00000566612 GNG5P63218 68 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 KIR3DL3Q8N743 410 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 C19orf24Q9BVV8 132 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 IL36BQ9NZH7 164 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 PYY3Q5JQD4 70 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 PRR31Q5SQ13 230 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 HIST3H2BBQ8N257 126 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 PRSS3P2Q8NHM4 247 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 CACNG8Q8WXS5 425 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 PGLYRP4Q96LB8 373 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 LOC105371242A0A075B767 164 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 FAM90A9PA6NNJ1 464 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 DIRC3C9JPN6 131 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 IGHV3-23P01764 117 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 TBR1Q16650 682 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 GOLT1AQ6ZVE7 132 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 TMEM242Q9NWH2 141 aa9.49□□□□□ -0.89
CDH1-210ENST00000566612 YTHDF2Q9Y5A9 579 aaKnown RBP9.49□□□□□ -0.89
CDH1-210ENST00000566612 UCNP55089 124 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 C17orf58Q2M2W7 97 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 TMEM177Q53S58 311 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 TEX38Q6PEX7 206 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 FA2HQ7L5A8 372 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 CORTO00230 105 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 GCGP01275 180 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 IL4P05112 153 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
CDH1-210ENST00000566612 MRPL32Q9BYC8 188 aaKnown RBP9.48□□□□□ -0.89
CDH1-210ENST00000566612 IGHV3OR16-13A0A075B7E8 117 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 IGHV3-74A0A0B4J1X5 117 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 A8MWL6 223 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 J3KRW8 73 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 IGLV2-14P01704 120 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 HNRNPA3P51991 378 aaKnown RBP9.48□□□□□ -0.89
CDH1-210ENST00000566612 COX19Q49B96 90 aa9.48□□□□□ -0.89
CDH1-210ENST00000566612 SLC25A48Q6ZT89 311 aaKnown RBP9.48□□□□□ -0.89
CDH1-210ENST00000566612 PIEZO1Q92508 2521 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 WNT2P09544 360 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 FOXA3P55318 350 aaPredicted RBP9.47□□□□□ -0.89
CDH1-210ENST00000566612 BPIFA4PQ86YQ2 179 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 FAM169BQ8N8A8 192 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 GSX1Q9H4S2 264 aaPredicted RBP9.47□□□□□ -0.89
CDH1-210ENST00000566612 IGHV3OR16-10A0A075B7F0 116 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 MSMPQ1L6U9 139 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 TMEM170AQ8WVE7 144 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 C1RLQ9NZP8 487 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 DPM3Q9P2X0 92 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 ISLRO14498 428 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 MT-ND6P03923 174 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 CDKN1AP38936 164 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 PPP1R27Q86WC6 154 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 KLHDC1Q8N7A1 406 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 BET1LQ9NYM9 111 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 PLXNB1O43157 2135 aa9.47□□□□□ -0.89
CDH1-210ENST00000566612 PEX7O00628 323 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 ORM1P02763 201 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 ADMP35318 185 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 GPX4P36969 197 aaPredicted RBP9.46□□□□□ -0.89
CDH1-210ENST00000566612 CCDC144NLQ6NUI1 221 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 ATOH7Q8N100 152 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 OR4A5Q8NH83 315 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 CBLN4Q9NTU7 201 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 CLEC5AQ9NY25 188 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 SPTBN5Q9NRC6 3674 aaKnown RBP9.46□□□□□ -0.89
CDH1-210ENST00000566612 H0YJW9 148 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 M0R143 59 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 HLA-DQA1P01909 254 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 CD33P20138 364 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 Q6ZN92 141 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 GBGT1Q8N5D6 347 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 SRSF12Q8WXF0 261 aaKnown RBP9.46□□□□□ -0.89
CDH1-210ENST00000566612 ZCCHC14Q8WYQ9 949 aaKnown RBP9.46□□□□□ -0.89
CDH1-210ENST00000566612 WNT10AQ9GZT5 417 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 ZNF257Q9Y2Q1 563 aa9.46□□□□□ -0.89
CDH1-210ENST00000566612 IGHV1-8P0DP01 117 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 VDAC2P45880 294 aaPredicted RBP9.46□□□□□ -0.9
CDH1-210ENST00000566612 LOXL3P58215 753 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms