RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, human

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH13-208	ENST00000566333	SUB1	P53999	127 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	TAS2R30	P59541	319 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	S100A10	P60903	97 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	CLEC19A	Q6UXS0	136 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	SLC16A13	Q7RTY0	426 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	HAPLN4	Q86UW8	402 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	OR1N2	Q8NGR9	330 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	PPP1R1C	Q8WVI7	109 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	RAB40C	Q96S21	281 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	ATP6V0B	Q99437	205 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	CHRDL1	Q9BU40	450 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	MED28	Q9H204	178 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	OR5AC2	Q9NZP5	309 aa		6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	PEF1	Q9UBV8	284 aa	Known RBP	6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	LSM5	Q9Y4Y9	91 aa	Known RBP	6.26	□□□□□ -1.41
CDH13-208	ENST00000566333	TRAV14DV4	A0A0A6YYC5	116 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333		G3V3Q6	166 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	TGOLN2	O43493	480 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	LY86	O95711	162 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	CTSG	P08311	255 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	OR8U8	P0C7N1	319 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	ARL3	P36405	182 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	ATP5I	P56385	69 aa	Predicted RBP	6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	CD69	Q07108	199 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	ARL16	Q0P5N6	197 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	MLANA	Q16655	118 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	LRRC37A5P	Q49AS3	106 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	FAM209B	Q5JX69	171 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	SPANXN5	Q5MJ07	72 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	PRSS54	Q6PEW0	395 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	TREML4	Q6UXN2	200 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333		Q6ZNX1	250 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	ACOT7L	Q6ZUV0	252 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	OR4X1	Q8NH49	305 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	CHAC2	Q8WUX2	184 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	DLX4	Q92988	240 aa	Predicted RBP	6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	BSCL2	Q96G97	398 aa	Predicted RBP	6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	RANGRF	Q9HD47	186 aa	Predicted RBP	6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	ZC4H2	Q9NQZ6	224 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	LYRM2	Q9NU23	88 aa	Predicted RBP	6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	PSENEN	Q9NZ42	101 aa		6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	STRAP	Q9Y3F4	350 aa	Known RBP	6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	PRKDC	P78527	4128 aa	Known RBP	6.25	□□□□□ -1.41
CDH13-208	ENST00000566333	IGKV1D-37	A0A075B6S9	117 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	IGKV1OR2-108	A0A075B7D4	117 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	IGSF23	A1L1A6	192 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	MPC2	O95563	127 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	IGKV1-17	P01599	117 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	IFNA4	P05014	189 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	CLEC3B	P05452	202 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	GIP	P09681	153 aa	Predicted RBP	6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	METTL15P1	P0C7V9	234 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	IGLC1	P0CG04	106 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	ZP3	P21754	424 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	RND2	P52198	227 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	MFAP4	P55083	255 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	CYCS	P99999	105 aa	Known RBP	6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	KLF5	Q13887	457 aa	Predicted RBP	6.24	□□□□□ -1.41
CDH13-208	ENST00000566333		Q56UQ5	140 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	ACSM6	Q6P461	480 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	UNQ9165/PRO28630	Q6UXU0	137 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	NOXA1	Q86UR1	476 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	UBAC2	Q8NBM4	344 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	TMEM116	Q8NCL8	245 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	WFDC9	Q8NEX5	89 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	DCUN1D4	Q92564	292 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	TXN2	Q99757	166 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	RNF126	Q9BV68	326 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	ZNF436	Q9C0F3	470 aa	Predicted RBP	6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	MBD2	Q9UBB5	411 aa		6.24	□□□□□ -1.41
CDH13-208	ENST00000566333	IGHV3-35	A0A0C4DH35	117 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	RPS10-NUDT3	A0A1W2PQS6	291 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	FAM24A	A6NFZ4	105 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333		A8MWP6	167 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	GGCT	O75223	188 aa	Known RBP	6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	CLN5	O75503	358 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	OR2C1	O95371	312 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	SLC25A4	P12235	298 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	LYL1	P12980	280 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	EDN2	P20800	178 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	CAV2	P51636	162 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	SYNJ2BP	P57105	145 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	RAB11A	P62491	216 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	RPP30	P78346	268 aa	Known RBP	6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	GAMT	Q14353	236 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	RPEL1	Q2QD12	228 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333		Q5BKY6	102 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	OR8G2P	Q6IF36	304 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	SPSB3	Q6PJ21	355 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	IL34	Q6ZMJ4	242 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	REC114	Q7Z4M0	266 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	C1QL4	Q86Z23	238 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	CACNG8	Q8WXS5	425 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	TMEM190	Q8WZ59	177 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	DPF1	Q92782	380 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	ACY3	Q96HD9	319 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	ZFAND3	Q9H8U3	227 aa		6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	PAIP2B	Q9ULR5	123 aa	Known RBP	6.23	□□□□□ -1.41
CDH13-208	ENST00000566333	TMEM213	A2RRL7	107 aa		6.22	□□□□□ -1.41
CDH13-208	ENST00000566333		E5RGE8	158 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms