RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CSN3P07498 182 aa16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 CTSGP08311 255 aa16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 ID3Q02535 119 aa16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 C12orf45Q8N5I9 185 aaPredicted RBP16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 CHRDL1Q9BU40 450 aa16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 PALMDQ9NP74 551 aa16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 IGLV1-51P01701 117 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 IAH1Q2TAA2 248 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 C11orf87Q6NUJ2 197 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 GPN1Q9HCN4 374 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 ZC4H2Q9NQZ6 224 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 AURKAIP1Q9NWT8 199 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 NDUFA4O00483 81 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 GNG7O60262 68 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 SLC25A4P12235 298 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 NKX2-1P43699 371 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 ELLP55199 621 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 RELQ04864 619 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 ETFRF1Q6IPR1 90 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 OR4X1Q8NH49 305 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 TMEM190Q8WZ59 177 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 OR10C1Q96KK4 312 aa16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 PRKDCP78527 4128 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-205ENST00000566016 C2orf70A6NJV1 201 aa16.02■□□□□ 0.15
SHCBP1-205ENST00000566016 SNRPGP15A8MWD9 76 aa16.02■□□□□ 0.15
SHCBP1-205ENST00000566016 INMT-MINDY4F8WBC2 141 aa16.02■□□□□ 0.15
SHCBP1-205ENST00000566016 IGHV3-48P01763 117 aa16.02■□□□□ 0.15
SHCBP1-205ENST00000566016 ZBTB8BQ8NAP8 495 aaPredicted RBP16.02■□□□□ 0.15
SHCBP1-205ENST00000566016 TMEM116Q8NCL8 245 aa16.02■□□□□ 0.15
SHCBP1-205ENST00000566016 TMEM213A2RRL7 107 aa16.01■□□□□ 0.15
SHCBP1-205ENST00000566016 PTTG1O95997 202 aa16.01■□□□□ 0.15
SHCBP1-205ENST00000566016 RPP30P78346 268 aaKnown RBP16.01■□□□□ 0.15
SHCBP1-205ENST00000566016 UNQ9165/PRO28630Q6UXU0 137 aa16.01■□□□□ 0.15
SHCBP1-205ENST00000566016 MAGT1Q9H0U3 335 aa16.01■□□□□ 0.15
SHCBP1-205ENST00000566016 UFC1Q9Y3C8 167 aa16.01■□□□□ 0.15
SHCBP1-205ENST00000566016 ZNF320A2RRD8 509 aa16■□□□□ 0.15
SHCBP1-205ENST00000566016 C15orf62A8K5M9 175 aa16■□□□□ 0.15
SHCBP1-205ENST00000566016 CLN5O75503 358 aa16■□□□□ 0.15
SHCBP1-205ENST00000566016 SCGB2A1O75556 95 aa16■□□□□ 0.15
SHCBP1-205ENST00000566016 IAPPP10997 89 aa16■□□□□ 0.15
SHCBP1-205ENST00000566016 MARC2Q969Z3 335 aa16■□□□□ 0.15
SHCBP1-205ENST00000566016 ZNF256Q9Y2P7 627 aaPredicted RBP16■□□□□ 0.15
SHCBP1-205ENST00000566016 IGHV3-35A0A0C4DH35 117 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 PRB2P02812 416 aaPredicted RBP15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 RAB11AP62491 216 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 CD69Q07108 199 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 PRSS54Q6PEW0 395 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 ADAMTSL5Q6ZMM2 481 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 UXS1Q8NBZ7 420 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 OR2K2Q8NGT1 345 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 ZNF414Q96IQ9 312 aa15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 DAZ1Q9NQZ3 744 aaKnown RBP15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 MRPL36Q9P0J6 103 aaKnown RBP15.99■□□□□ 0.15
SHCBP1-205ENST00000566016 TRAV30A0A087WSZ9 112 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 WRBO00258 174 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 CCSO14618 274 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 TMEM50AO95807 157 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 IFNA4P05014 189 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 FOLR2P14207 255 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 CBLN1P23435 193 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 POLR2GP62487 172 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 CACNG8Q8WXS5 425 aa15.98■□□□□ 0.15
SHCBP1-205ENST00000566016 C8orf88P0DMB2 117 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 GPX4P36969 197 aaPredicted RBP15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 MLANAQ16655 118 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 SLC16A13Q7RTY0 426 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 RAB40CQ96S21 281 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 TECRQ9NZ01 308 aaKnown RBP15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 GSKIPQ9P0R6 139 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 K7EMT4 169 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 RND2P52198 227 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 TAS2R30P59541 319 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 LCN12Q6JVE5 192 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 ZNF600Q6ZNG1 722 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 SMIM8Q96KF7 97 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 C2orf50Q96LR7 162 aa15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 MRPL27Q9P0M9 148 aaKnown RBP15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 RCL1Q9Y2P8 373 aaKnown RBP15.97■□□□□ 0.15
SHCBP1-205ENST00000566016 WI2-2373I1.2A0A1W2PRP0 233 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 C5orf51A6NDU8 294 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 SSSCA1O60232 199 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 IGKV1-17P01599 117 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 IGLC1P0CG04 106 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 SPNP16150 400 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 TM4SF20Q53R12 229 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 GSG1LQ6UXU4 331 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 HAPLN4Q86UW8 402 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 DYNLRB2Q8TF09 96 aa15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 STRAPQ9Y3F4 350 aaKnown RBP15.96■□□□□ 0.14
SHCBP1-205ENST00000566016 FAM25EA8MYX2 175 aa15.95■□□□□ 0.14
SHCBP1-205ENST00000566016 K7EIL1 84 aa15.95■□□□□ 0.14
SHCBP1-205ENST00000566016 SCGB1D2O95969 90 aa15.95■□□□□ 0.14
SHCBP1-205ENST00000566016 MBPP02686 304 aaPredicted RBP15.95■□□□□ 0.14
SHCBP1-205ENST00000566016 DCTN2Q13561 401 aaKnown RBP15.95■□□□□ 0.14
SHCBP1-205ENST00000566016 TGP01266 2768 aa15.94■□□□□ 0.14
SHCBP1-205ENST00000566016 PRSS46E5RG02 174 aa15.94■□□□□ 0.14
SHCBP1-205ENST00000566016 TSC22D2O75157 780 aa15.94■□□□□ 0.14
SHCBP1-205ENST00000566016 DEFB114Q30KQ6 69 aa15.94■□□□□ 0.14
SHCBP1-205ENST00000566016 SPANXN5Q5MJ07 72 aa15.94■□□□□ 0.14
SHCBP1-205ENST00000566016 OR1S2Q8NGQ3 325 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms