RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 GINS3Q9BRX5 216 aa14.95□□□□□ -0.02
CMTM3-211ENST00000565922 CENPXA8MT69 81 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 YIF1AO95070 293 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 IGHV3-48P01763 117 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 BMI1P35226 326 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 C2orf83Q53S99 150 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 LYZL2Q7Z4W2 148 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 SLC24A4Q8NFF2 622 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 OR52B4Q8NGK2 314 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 C7orf50Q9BRJ6 194 aaKnown RBP14.94□□□□□ -0.02
CMTM3-211ENST00000565922 PRR13Q9NZ81 148 aa14.94□□□□□ -0.02
CMTM3-211ENST00000565922 A0A1B0GU03 582 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 OR11H12B2RN74 326 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 SCAF4O95104 1147 aaKnown RBP14.93□□□□□ -0.02
CMTM3-211ENST00000565922 CD7P09564 240 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 UBE2MP61081 183 aaKnown RBP14.93□□□□□ -0.02
CMTM3-211ENST00000565922 BAK1Q16611 211 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 ZNF600Q6ZNG1 722 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 LRTM2Q8N967 370 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 RNASEH2CQ8TDP1 164 aaKnown RBP14.93□□□□□ -0.02
CMTM3-211ENST00000565922 OR10C1Q96KK4 312 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 RCHY1Q96PM5 261 aa14.93□□□□□ -0.02
CMTM3-211ENST00000565922 SPAG8Q99932 426 aaPredicted RBP14.93□□□□□ -0.02
CMTM3-211ENST00000565922 TNFRSF9Q07011 255 aa14.92□□□□□ -0.02
CMTM3-211ENST00000565922 ETFRF1Q6IPR1 90 aa14.92□□□□□ -0.02
CMTM3-211ENST00000565922 OR4X1Q8NH49 305 aa14.92□□□□□ -0.02
CMTM3-211ENST00000565922 OR1S1Q8NH92 325 aa14.92□□□□□ -0.02
CMTM3-211ENST00000565922 TM2D3Q9BRN9 247 aa14.92□□□□□ -0.02
CMTM3-211ENST00000565922 HSPB7Q9UBY9 170 aa14.92□□□□□ -0.02
CMTM3-211ENST00000565922 TRAV30A0A087WSZ9 112 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 TSPAN4O14817 238 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 CLN5O75503 358 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 SFT2D2O95562 160 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 TMEM50AO95807 157 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 SLC25A4P12235 298 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 NPY1RP25929 384 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 SPATA25Q9BR10 227 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 SMPXQ9UHP9 88 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 TMED3Q9Y3Q3 217 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 U3KQ87 197 aa14.91□□□□□ -0.02
CMTM3-211ENST00000565922 IGHV3OR16-8A0A075B7F1 116 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 TRAV14DV4A0A0A6YYC5 116 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 IGHV7-4-1A0A0J9YVY3 117 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 ZNF207O43670 478 aaKnown RBP14.9□□□□□ -0.02
CMTM3-211ENST00000565922 NDUFB6O95139 128 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 NXPH3O95157 252 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 SLC25A6P12236 298 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 ATP5IP56385 69 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-211ENST00000565922 PPP1R1AQ13522 171 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 TMEM116Q8NCL8 245 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 DTD1Q8TEA8 209 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 FNDC4Q9H6D8 234 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-211ENST00000565922 SRD5A3Q9H8P0 318 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 SELENOKQ9Y6D0 94 aa14.9□□□□□ -0.02
CMTM3-211ENST00000565922 IFNA10P01566 189 aa14.89□□□□□ -0.03
CMTM3-211ENST00000565922 CD5P06127 495 aa14.89□□□□□ -0.03
CMTM3-211ENST00000565922 IL7P13232 177 aa14.89□□□□□ -0.03
CMTM3-211ENST00000565922 CNPY1Q3B7I2 92 aa14.89□□□□□ -0.03
CMTM3-211ENST00000565922 DEFB125Q8N687 156 aa14.89□□□□□ -0.03
CMTM3-211ENST00000565922 SDHCQ99643 169 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-211ENST00000565922 OR4C46A6NHA9 309 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 FAM90A26D6RGX4 464 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 HAGHQ16775 308 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 TOMM20LQ6UXN7 152 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 LINC00299Q6ZSB3 139 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 RHPN1-AS1Q9BWJ2 59 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 RBKSQ9H477 322 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 TMEM231Q9H6L2 316 aa14.88□□□□□ -0.03
CMTM3-211ENST00000565922 PUS1Q9Y606 427 aaKnown RBP eCLIP14.88□□□□□ -0.03
CMTM3-211ENST00000565922 CHEK1O14757 476 aa14.87□□□□□ -0.03
CMTM3-211ENST00000565922 MED6O75586 246 aa14.87□□□□□ -0.03
CMTM3-211ENST00000565922 OR1S2Q8NGQ3 325 aa14.87□□□□□ -0.03
CMTM3-211ENST00000565922 ZNF414Q96IQ9 312 aa14.87□□□□□ -0.03
CMTM3-211ENST00000565922 ZFAND3Q9H8U3 227 aa14.87□□□□□ -0.03
CMTM3-211ENST00000565922 LINC00854A0A1B0GVQ3 168 aa14.86□□□□□ -0.03
CMTM3-211ENST00000565922 LINC00322Q6ZN03 302 aaPredicted RBP14.86□□□□□ -0.03
CMTM3-211ENST00000565922 COQ8AQ8NI60 647 aa14.86□□□□□ -0.03
CMTM3-211ENST00000565922 WFDC10AQ9H1F0 79 aa14.86□□□□□ -0.03
CMTM3-211ENST00000565922 A0A1W2PS18 150 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 PITX3O75364 302 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 RND2P52198 227 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 MLANAQ16655 118 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 PRSS54Q6PEW0 395 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 NARS2Q96I59 477 aaKnown RBP14.85□□□□□ -0.03
CMTM3-211ENST00000565922 CIB3Q96Q77 187 aaPredicted RBP14.85□□□□□ -0.03
CMTM3-211ENST00000565922 METTL26Q96S19 204 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 RNF2Q99496 336 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 FAM110AQ9BQ89 295 aa14.85□□□□□ -0.03
CMTM3-211ENST00000565922 MRPL36Q9P0J6 103 aaKnown RBP14.85□□□□□ -0.03
CMTM3-211ENST00000565922 C9orf170A2RU37 121 aa14.84□□□□□ -0.03
CMTM3-211ENST00000565922 IFNA4P05014 189 aa14.84□□□□□ -0.03
CMTM3-211ENST00000565922 HOXB5P09067 269 aa14.84□□□□□ -0.03
CMTM3-211ENST00000565922 CMC4P56277 68 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-211ENST00000565922 RAB11AP62491 216 aa14.84□□□□□ -0.03
CMTM3-211ENST00000565922 PAFAH1B2P68402 229 aa14.84□□□□□ -0.03
CMTM3-211ENST00000565922 CCDC32Q9BV29 185 aa14.84□□□□□ -0.03
CMTM3-211ENST00000565922 HUWE1Q7Z6Z7 4374 aaKnown RBP14.84□□□□□ -0.03
CMTM3-211ENST00000565922 IGHV3-49A0A0A0MS15 119 aa14.83□□□□□ -0.04
CMTM3-211ENST00000565922 RBMY1BA6NDE4 496 aaKnown RBP14.83□□□□□ -0.04
CMTM3-211ENST00000565922 RBMY1EA6NEQ0 496 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms