RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TMEM170AQ8WVE7 144 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 UBE2E2Q96LR5 201 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 HYLS1Q96M11 299 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 TXN2Q99757 166 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 CITED2Q99967 270 aaPredicted RBP6.06□□□□□ -1.44
CDH1-208ENST00000565810 GGACTQ9BVM4 153 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 DMRT1Q9Y5R6 373 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 TNCP24821 2201 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 TRAV30A0A087WSZ9 112 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 MFSD2BA6NFX1 497 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 PMS2P5A8MQ11 134 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 FNDC10F2Z333 226 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 K7EIM0 57 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 ARPC5O15511 151 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 GNG7O60262 68 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 DFFBO76075 338 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 IGHV3-11P01762 117 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 IGHV3-23P01764 117 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 DLK1P80370 383 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 NHLH2Q02577 135 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 AKR1C1Q04828 323 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 SLC38A11Q08AI6 406 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 OR2F1Q13607 317 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 MLANAQ16655 118 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 OR5C1Q8NGR4 320 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 OR4X1Q8NH49 305 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 MYOZ3Q8TDC0 251 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 DPF1Q92782 380 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 ACY3Q96HD9 319 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 AQP10Q96PS8 301 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 ATP6V0BQ99437 205 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 NEURL2Q9BR09 285 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 MFFQ9GZY8 342 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 NPVFQ9HCQ7 196 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 UQCC1Q9NVA1 299 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 PEF1Q9UBV8 284 aaKnown RBP6.05□□□□□ -1.44
CDH1-208ENST00000565810 TNFSF18Q9UNG2 199 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 HSPB11Q9Y547 144 aa6.05□□□□□ -1.44
CDH1-208ENST00000565810 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 A0A0D9SG52 128 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 G3V3Q6 166 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 NUPL2O15504 423 aaKnown RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 CLN5O75503 358 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 IFNA5P01569 189 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 IGHV3-48P01763 117 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 HSPB1P04792 205 aaKnown RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 CLEC3BP05452 202 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 FABP1P07148 127 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 LGALS1P09382 135 aaKnown RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 FCGR2BP31994 310 aaPredicted RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 GPR183P32249 361 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 RND2P52198 227 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 DEFA5Q01523 94 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 ARL16Q0P5N6 197 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 RAB31Q13636 194 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 KIAA0141Q14154 515 aaPredicted RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 GAMTQ14353 236 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 CLINT1Q14677 625 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 NSUN5P1Q3KNT7 163 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 TCTEX1D4Q5JR98 221 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 ZNF343Q6P1L6 599 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 CLEC19AQ6UXS0 136 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 NDUFA11Q86Y39 141 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 TMEM116Q8NCL8 245 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 KLHL30-AS1Q8NEE0 82 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 ZNF502Q8TBZ5 544 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 SCGB1C1Q8TD33 95 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 NPIPB3Q92617 1050 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 BSCL2Q96G97 398 aaPredicted RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 OR5B12Q96R08 314 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 TMEM147Q9BVK8 224 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 SMIM3Q9BZL3 60 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 FNDC4Q9H6D8 234 aaPredicted RBP6.04□□□□□ -1.44
CDH1-208ENST00000565810 GNB4Q9HAV0 340 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 S4R3C0 116 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 PLXNB1O43157 2135 aa6.04□□□□□ -1.44
CDH1-208ENST00000565810 C2CD3Q4AC94 2353 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 KANTRA0A1W2PQU2 76 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 A0A1W2PRX2 142 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 ANKRD34BA5PLL1 514 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 RNF222A6NCQ9 220 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 OR2T8A6NH00 312 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 ZFP92A6NM28 416 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 PRSS46E5RG02 174 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 TAAR5O14804 337 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 TGOLN2O43493 480 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 GGCTO75223 188 aaKnown RBP6.03□□□□□ -1.44
CDH1-208ENST00000565810 C4BPBP20851 252 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 OR10J1P30954 320 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 ARL3P36405 182 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 RUNX1Q01196 453 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 RELQ04864 619 aaPredicted RBP6.03□□□□□ -1.44
CDH1-208ENST00000565810 ZNF266Q14584 549 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 ZNF345Q14585 488 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 SPSB3Q6PJ21 355 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 TEPPQ6URK8 271 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 SHISA2Q6UWI4 295 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 TMEM144Q7Z5S9 345 aa6.03□□□□□ -1.44
CDH1-208ENST00000565810 HAPLN4Q86UW8 402 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms