RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CCNKO75909 580 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 JTBO76095 146 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 CNIH1O95406 144 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 PTTG1O95997 202 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 IGHV3-48P01763 117 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 HLA-DRB1P01911 266 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 HLA-GP17693 338 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 PAX9P55771 341 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 H2BFSP57053 126 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 RPL8P62917 257 aaKnown RBP4.72□□□□□ -1.65
UBFD1-204ENST00000565634 CFHR3Q02985 330 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 PLGLAQ15195 96 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 VMA21Q3ZAQ7 101 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 Q6ZWC4 215 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 H2BFWTQ7Z2G1 175 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 SLC35E3Q7Z769 313 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 CADM3Q8N126 398 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 LGI3Q8N145 548 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 LRTM2Q8N967 370 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 MINDY2Q8NBR6 621 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 OR11H7Q8NGC8 314 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 CD300LFQ8TDQ1 290 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 SRSF12Q8WXF0 261 aaKnown RBP4.72□□□□□ -1.65
UBFD1-204ENST00000565634 DPF1Q92782 380 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 RBPMSQ93062 196 aaKnown RBP4.72□□□□□ -1.65
UBFD1-204ENST00000565634 RNF126Q9BV68 326 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 HINT2Q9BX68 163 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 RBKSQ9H477 322 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 NDUFA4L2Q9NRX3 87 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 FAM212BQ9NTI7 297 aaPredicted RBP4.72□□□□□ -1.65
UBFD1-204ENST00000565634 TMEM14BQ9NUH8 114 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 COMMD9Q9P000 198 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 FBXL17Q9UF56 701 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 PITPNC1Q9UKF7 332 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 OR51B2Q9Y5P1 312 aa4.72□□□□□ -1.65
UBFD1-204ENST00000565634 A0A0B4J2A0 478 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 IGLC7A0M8Q6 106 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 C7orf66A4D0T2 115 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 C15orf61A6NNL5 157 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 FAM25EA8MYX2 175 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 H0YIZ8 118 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 SMLR1H3BR10 107 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 NDUFB8O95169 186 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 SPDEFO95238 335 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 LY6G6CO95867 125 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 IGHV3-23P01764 117 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 OR13C7P0DN81 318 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 VDAC1P21796 283 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 VDAC2P45880 294 aaPredicted RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 RPL27AP46776 148 aaKnown RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 HSPE1P61604 102 aaKnown RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 SUMO2P61956 95 aaKnown RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 POLR2GP62487 172 aaKnown RBP eCLIP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 ECSCRQ19T08 205 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 UNQ5815/PRO19632Q6UWF5 114 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 STPG2Q8N412 459 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 RPP25LQ8N5L8 163 aaKnown RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 TCTEX1D1Q8N7M0 179 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 OR8H1Q8NGG4 311 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 OR4D5Q8NGN0 318 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 LSM10Q969L4 123 aaKnown RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 ZNF414Q96IQ9 312 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 NPFFR1Q9GZQ6 430 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 C11orf1Q9H5F2 150 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 MRPL36Q9P0J6 103 aaKnown RBP4.71□□□□□ -1.66
UBFD1-204ENST00000565634 GSKIPQ9P0R6 139 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 KIAA1456Q9P272 454 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 SHPKQ9UHJ6 478 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 HECTD4Q9Y4D8 3996 aa4.71□□□□□ -1.66
UBFD1-204ENST00000565634 TRAV41A0A0B4J266 112 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 SNRPGP15A8MWD9 76 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 GOSR2O14653 212 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 DHFRP00374 187 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 TRBV12-3P01733 135 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 IGF1P05019 195 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 TRAPPC2P0DI81 140 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 TRAPPC2BP0DI82 140 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 IAPPP10997 89 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 S100GP29377 79 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 ARHGDIBP52566 201 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 AKR1C2P52895 323 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 CRIP2P52943 208 aaPredicted RBP4.7□□□□□ -1.66
UBFD1-204ENST00000565634 ARL16Q0P5N6 197 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 SMCO1Q147U7 214 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 IAH1Q2TAA2 248 aaPredicted RBP4.7□□□□□ -1.66
UBFD1-204ENST00000565634 AARDQ4LEZ3 155 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 C16orf82Q7Z2V1 217 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 CENPVQ7Z7K6 275 aaPredicted RBP4.7□□□□□ -1.66
UBFD1-204ENST00000565634 FOXRED2Q8IWF2 684 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 MMD2Q8IY49 270 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 OR1L8Q8NGR8 309 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 OR4A16Q8NH70 328 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 ARPC1AQ92747 370 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 IL22RA2Q969J5 263 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 OR5B12Q96R08 314 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 P2RX4Q99571 388 aa4.7□□□□□ -1.66
UBFD1-204ENST00000565634 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
UBFD1-204ENST00000565634 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms