RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	CACNG8	Q8WXS5	425 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	IGF2BP2-AS1	Q96M15	143 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	HARBI1	Q96MB7	349 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	OSTC	Q9NRP0	149 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	MSRB2	Q9Y3D2	182 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	TRBV9	A0A0B4J1U6	114 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	EREG	O14944	169 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	CRYAB	P02511	175 aa	Known RBP	10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	CHRNB4	P30926	498 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	MEF2C	Q06413	473 aa	Predicted RBP	10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	TMEM177	Q53S58	311 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	OR2T6	Q8NHC8	308 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	GAL3ST2	Q9H3Q3	398 aa		10.66	□□□□□ -0.7
SCAPER-215	ENST00000565507	CGB1	A6NKQ9	187 aa		10.65	□□□□□ -0.7
SCAPER-215	ENST00000565507	PPOX	P50336	477 aa		10.65	□□□□□ -0.7
SCAPER-215	ENST00000565507	RPL8	P62917	257 aa	Known RBP	10.65	□□□□□ -0.7
SCAPER-215	ENST00000565507	SLC25A2	Q9BXI2	301 aa		10.65	□□□□□ -0.7
SCAPER-215	ENST00000565507	MAP1A	P78559	2803 aa	Predicted RBP	10.65	□□□□□ -0.7
SCAPER-215	ENST00000565507	TRAV5	A0A0B4J249	113 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	ISLR	O14498	428 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	TPPP2	P59282	170 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	SSBP2	P81877	361 aa	Predicted RBP	10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	FXYD3	Q14802	87 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	TIGIT	Q495A1	244 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	TPTE2P1	Q5T6R2	138 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	TMEM200B	Q69YZ2	307 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	COMMD5	Q9GZQ3	224 aa		10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.65	□□□□□ -0.71
SCAPER-215	ENST00000565507	ACACB	O00763	2458 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	C17orf100	A8MU93	164 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	APOA2	P02652	100 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	TNFRSF1A	P19438	455 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	REG1B	P48304	166 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	DIAPH2-AS1	Q14236	149 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	ADIPOQ	Q15848	244 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	USF2	Q15853	346 aa	Predicted RBP	10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	GFRAL	Q6UXV0	394 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	ZNF714	Q96N38	554 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	TBX15	Q96SF7	602 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	MRPL32	Q9BYC8	188 aa	Known RBP	10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	NKX6-3	A6NJ46	265 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	RAN	P62826	216 aa	Known RBP	10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	WT1-AS	Q06250	92 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	TDRG1	Q3Y452	100 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	TMEM108	Q6UXF1	575 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	TMEM136	Q6ZRR5	245 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	TMEM167A	Q8TBQ9	72 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	SNHG12	Q9BXW3	62 aa		10.64	□□□□□ -0.71
SCAPER-215	ENST00000565507	DPRX	A6NFQ7	191 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	ERH	P84090	104 aa	Known RBP	10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	TEX43	Q6ZNM6	134 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	FLYWCH2	Q96CP2	140 aa	Known RBP	10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	HSPB9	Q9BQS6	159 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	GNB4	Q9HAV0	340 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	DNAJC4	Q9NNZ3	241 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	CBLN4	Q9NTU7	201 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	ARFGEF3	Q5TH69	2177 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	SMIM27	A0A1W2PRY6	76 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	SPINK4	O60575	86 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	IGLV2-23	P01705	113 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	USF1	P22415	310 aa	Predicted RBP	10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	CDKN1A	P38936	164 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	BAGE3	Q86Y29	109 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	BAGE2	Q86Y30	109 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	TGIF2LX	Q8IUE1	241 aa		10.63	□□□□□ -0.71
SCAPER-215	ENST00000565507	IGKV1D-37	A0A075B6S9	117 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	TNFRSF13B	O14836	293 aa	Predicted RBP	10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	FSTL3	O95633	263 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	MT-ND6	P03923	174 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	ZNF705D	P0CH99	300 aa	Predicted RBP	10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	ZNF705B	P0CI00	300 aa	Predicted RBP	10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	SLC35B1	P78383	322 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	C10orf55	Q5SWW7	151 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	IBA57	Q5T440	356 aa	Known RBP	10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	PATE2	Q6UY27	113 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	OR4C13	Q8NGP0	309 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	ZNF596	Q8TC21	504 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	ST6GALNAC6	Q969X2	333 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	LINC00479	Q96M42	142 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	NAT8B	Q9UHF3	227 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	NAV3	Q8IVL0	2385 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	COMP	P49747	757 aa	Predicted RBP	10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	UBE2L3	P68036	154 aa	Known RBP	10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	OR5AU1	Q8NGC0	362 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	CDC42EP3	Q9UKI2	254 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	RNF114	Q9Y508	228 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	FLNC	Q14315	2725 aa		10.62	□□□□□ -0.71
SCAPER-215	ENST00000565507	TMEM178B	H3BS89	294 aa		10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	THBD	P07204	575 aa		10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	TCL1A	P56279	114 aa		10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	NUTF2	P61970	127 aa	Known RBP	10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	WDR73	Q6P4I2	378 aa		10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	TOMM20L	Q6UXN7	152 aa		10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	OR4A5	Q8NH83	315 aa		10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	RNF2	Q99496	336 aa		10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507	MRPL36	Q9P0J6	103 aa	Known RBP	10.61	□□□□□ -0.71
SCAPER-215	ENST00000565507		A0A1W2PN81	502 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms