RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SPAG8Q99932 426 aaPredicted RBP6.61□□□□□ -1.35
VPS9D1-205ENST00000565452 TMEM56-RWDD3S4R434 201 aa6.61□□□□□ -1.35
VPS9D1-205ENST00000565452 IGLV2-18A0A075B6J9 118 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 TRBV9A0A0B4J1U6 114 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 TMEM213A2RRL7 107 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 UPK2O00526 184 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 KRASP01116 189 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 SAA1P0DJI8 122 aaPredicted RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 BTCP35070 178 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 CMC4P56277 68 aaPredicted RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 RPL8P62917 257 aaKnown RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 TMEM187Q14656 261 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 OR2B11Q5JQS5 317 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 LAMTOR1Q6IAA8 161 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 BTNL8Q6UX41 500 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 H2BFWTQ7Z2G1 175 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 HSD17B13Q7Z5P4 300 aaPredicted RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 LGI3Q8N145 548 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 LRTM2Q8N967 370 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 OR5B3Q8NH48 314 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 RBPMSQ93062 196 aaKnown RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 LSM10Q969L4 123 aaKnown RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 RRNAD1Q96FB5 475 aaKnown RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 TP53RKQ96S44 253 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 SPIN2AQ99865 258 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 SPIN2BQ9BPZ2 258 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 SRSF8Q9BRL6 282 aaKnown RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 NDUFAF3Q9BU61 184 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 MRPL27Q9P0M9 148 aaKnown RBP6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 DMRT1Q9Y5R6 373 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 DNAH5Q8TE73 4624 aa6.6□□□□□ -1.35
VPS9D1-205ENST00000565452 A0A0B4J2A0 478 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 TSPAN4O14817 238 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 S1PR2O95136 353 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 OR5AC1P0C628 307 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 OR4E1P0C645 316 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 RBMY1A1P0DJD3 496 aaKnown RBP6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 C8orf88P0DMB2 117 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 APELAP0DMC3 54 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 SUPT4H1P63272 117 aaKnown RBP6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 SSBP2P81877 361 aaPredicted RBP6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 TRIM16LQ309B1 348 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 C15orf32Q32M92 178 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 TMED4Q7Z7H5 227 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 UBE2DNLQ8IWF7 75 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 SELENOHQ8IZQ5 122 aaKnown RBP6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 OR4A16Q8NH70 328 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 ENKURQ8TC29 256 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 TMEM230Q96A57 120 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 COMMD5Q9GZQ3 224 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 ZNF430Q9H8G1 570 aaPredicted RBP6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 TMEM140Q9NV12 185 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 SHPKQ9UHJ6 478 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 PRNDQ9UKY0 176 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 TBC1D24Q9ULP9 559 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 ZNF257Q9Y2Q1 563 aa6.59□□□□□ -1.35
VPS9D1-205ENST00000565452 OR4C46A6NHA9 309 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 A8MWP6 167 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 SFT2D2O95562 160 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 IGKV1-39P01597 117 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 PRH1P02810 166 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 IGKV1D-39P04432 117 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 IL5P05113 134 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 SLC25A6P12236 298 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 HLA-GP17693 338 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 G6PCP35575 357 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 ARL3P36405 182 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 AKR1C2P52895 323 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 IFITM3Q01628 133 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 TNXAQ16473 311 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 SP6Q3SY56 376 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 PLET1Q6UQ28 207 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 Q6ZTC4 211 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 SSX9Q7RTT3 188 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 VKORC1L1Q8N0U8 176 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 OR1L8Q8NGR8 309 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 C20orf85Q9H1P6 137 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 TMEM14BQ9NUH8 114 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 TMED3Q9Y3Q3 217 aa6.58□□□□□ -1.36
VPS9D1-205ENST00000565452 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 A0A1B0GU03 582 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 C9orf170A2RU37 121 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 CYB5BO43169 146 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 PRAF2O60831 178 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 OR2J3O76001 311 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 PTTG1O95997 202 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 DHFRP00374 187 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 AMBPP02760 352 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 P0C879 139 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 TRAPPC2P0DI81 140 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 TRAPPC2BP0DI82 140 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 MYOD1P15172 320 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 VAMP1P23763 118 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 RPL27AP46776 148 aaKnown RBP6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 ELLP55199 621 aaPredicted RBP6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 HSPE1P61604 102 aaKnown RBP6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 DHRS2Q13268 280 aa6.57□□□□□ -1.36
VPS9D1-205ENST00000565452 PPP1R1AQ13522 171 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms