RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CD5P06127 495 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 GIG44P09565 113 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-213ENST00000565173 S100GP29377 79 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 RCVRNP35243 200 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 RND3P61587 244 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PAFAH1B2P68402 229 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 MRPS10P82664 201 aaKnown RBP6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PRR20EP86478 221 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PRR20CP86479 221 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PRR20DP86480 221 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PRR20BP86481 221 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PRR20AP86496 221 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 SPINK9Q5DT21 86 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 LEMD1Q68G75 181 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 LHFPL1Q86WI0 220 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 TP53RKQ96S44 253 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
CAPN3-213ENST00000565173 MRPL36Q9P0J6 103 aaKnown RBP6.26□□□□□ -1.41
CAPN3-213ENST00000565173 RABL2AQ9UBK7 228 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-213ENST00000565173 RABL2BQ9UNT1 228 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PUS1Q9Y606 427 aaKnown RBP eCLIP6.26□□□□□ -1.41
CAPN3-213ENST00000565173 PKD1P98161 4303 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 GABARAPH6UMI1 98 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 DEFB4AO15263 64 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 ST8SIA3O43173 380 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 CA1P00915 261 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-213ENST00000565173 RNASE2P10153 161 aaKnown RBP6.25□□□□□ -1.41
CAPN3-213ENST00000565173 PI3P19957 117 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 ETV6P41212 452 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 NPBWR1P48145 328 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 DEFB131AP59861 70 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 MLANAQ16655 118 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 ZNF600Q6ZNG1 722 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 DUSP18Q8NEJ0 188 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 GINS3Q9BRX5 216 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 FNDC4Q9H6D8 234 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-213ENST00000565173 BATF3Q9NR55 127 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 KLK11Q9UBX7 282 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 MTFP1Q9UDX5 166 aa6.25□□□□□ -1.41
CAPN3-213ENST00000565173 A0A0G2JRQ6 117 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 CTDSPLO15194 276 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 RBMY1A1P0DJD3 496 aaKnown RBP6.24□□□□□ -1.41
CAPN3-213ENST00000565173 RBMY1CP0DJD4 496 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 CRYBB3P26998 211 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 PIGPP57054 158 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 TMEM187Q14656 261 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 RBMY1FQ15415 496 aaKnown RBP6.24□□□□□ -1.41
CAPN3-213ENST00000565173 RBMS2Q15434 407 aaKnown RBP6.24□□□□□ -1.41
CAPN3-213ENST00000565173 CNPY1Q3B7I2 92 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 BSXQ3C1V8 233 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 SP6Q3SY56 376 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 PYDC2Q56P42 97 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 SPANXN2Q5MJ10 180 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 Q6ZRM9 215 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 CCDC190Q86UF4 302 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 Q8NAQ8 132 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 OR4X1Q8NH49 305 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 SMIM4Q8WVI0 70 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 ZNF486Q96H40 463 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-213ENST00000565173 MFFQ9GZY8 342 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 FBXL17Q9UF56 701 aa6.24□□□□□ -1.41
CAPN3-213ENST00000565173 KIAA1109Q2LD37 5005 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 C3orf85A0A1B0GTC6 90 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 K7EQG2 157 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 DNASE2O00115 360 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-213ENST00000565173 CLN5O75503 358 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 RAB3DO95716 219 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 IFNA17P01571 189 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 IGKV1-17P01599 117 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 CD3DP04234 171 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 IFNA4P05014 189 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 PGAM2P15259 253 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 NPPCP23582 126 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 SNCAP37840 140 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 PPP5CP53041 499 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 TAS2R19P59542 299 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 RPL11P62913 178 aaKnown RBP6.23□□□□□ -1.41
CAPN3-213ENST00000565173 AARDQ4LEZ3 155 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 RNASE10Q5GAN6 216 aaKnown RBP6.23□□□□□ -1.41
CAPN3-213ENST00000565173 TRPT1Q86TN4 253 aaKnown RBP6.23□□□□□ -1.41
CAPN3-213ENST00000565173 ARRDC1Q8N5I2 433 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 TMEM229BQ8NBD8 167 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 OR4D10Q8NGI6 311 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 C2CD4CQ8TF44 421 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 DCANP1Q8TF63 244 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 SOSTQ9BQB4 213 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 HRH4Q9H3N8 390 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 APLNQ9ULZ1 77 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 U3KQE9 123 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 V9GYH0 126 aa6.23□□□□□ -1.41
CAPN3-213ENST00000565173 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 ZNF705EA8MWA4 302 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-213ENST00000565173 CORTO00230 105 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 GSTZ1O43708 216 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-213ENST00000565173 CD74P04233 296 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 TBPP20226 339 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 C4BPBP20851 252 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 UCP1P25874 307 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 AKR1C2P52895 323 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms