RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 MRPL18Q9H0U6 180 aaKnown RBP12.32□□□□□ -0.44
HERC2-207ENST00000564734 YLPM1P49750 1951 aaKnown RBP12.32□□□□□ -0.44
HERC2-207ENST00000564734 KALRNO60229 2985 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
HERC2-207ENST00000564734 OR1L6Q8NGR2 347 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 OSTCQ9NRP0 149 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 IGKV1D-37A0A075B6S9 117 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 TRAV5A0A0B4J249 113 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 NDUFB3O43676 98 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 UCNP55089 124 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 VSTM2AQ8TAG5 236 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 CCL17Q92583 94 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 RNF2Q99496 336 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 SPTAN1Q13813 2472 aaKnown RBP12.31□□□□□ -0.44
HERC2-207ENST00000564734 GRIFINA4D1Z8 144 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 SUMO1P63165 101 aaKnown RBP12.31□□□□□ -0.44
HERC2-207ENST00000564734 IQCJQ1A5X6 159 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 C10orf55Q5SWW7 151 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 OR10X1Q8NGY0 326 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 H1FXQ92522 213 aaKnown RBP12.31□□□□□ -0.44
HERC2-207ENST00000564734 ZNF430Q9H8G1 570 aaPredicted RBP12.31□□□□□ -0.44
HERC2-207ENST00000564734 DNAJC4Q9NNZ3 241 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 KAAG1Q9UBP8 84 aa12.31□□□□□ -0.44
HERC2-207ENST00000564734 FSTL3O95633 263 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 PPOXP50336 477 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 LY6DQ14210 128 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 LRRC10Q5BKY1 277 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 SSX8Q7RTT4 187 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 RNASE6Q93091 150 aaKnown RBP12.3□□□□□ -0.44
HERC2-207ENST00000564734 WASHC3Q9Y3C0 194 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 ISLRO14498 428 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 PATE2Q6UY27 113 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 THAP8Q8NA92 274 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 TNCP24821 2201 aa12.3□□□□□ -0.44
HERC2-207ENST00000564734 TRBV9A0A0B4J1U6 114 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 SHISA9B4DS77 424 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 TMEM155Q4W5P6 130 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 DMRTC2Q8IXT2 367 aaPredicted RBP12.29□□□□□ -0.44
HERC2-207ENST00000564734 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 RITA1Q96K30 269 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 RNASE7Q9H1E1 156 aaKnown RBP12.29□□□□□ -0.44
HERC2-207ENST00000564734 PLCE1Q9P212 2302 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 CX3CL1P78423 397 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 PVRIGQ6DKI7 326 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 ST6GALNAC3Q8NDV1 305 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 BEND2Q8NDZ0 799 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
HERC2-207ENST00000564734 MRPL36Q9P0J6 103 aaKnown RBP12.29□□□□□ -0.44
HERC2-207ENST00000564734 SMG1Q96Q15 3661 aaKnown RBP12.29□□□□□ -0.44
HERC2-207ENST00000564734 IER3P46695 156 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 Q0VG73 95 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 TIGITQ495A1 244 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 NDUFAF3Q9BU61 184 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 TCRBV4S1A1TA0A5B7 111 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 TPSG1Q9NRR2 321 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 BSNQ9UPA5 3926 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 E7EQL1 145 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 FCN1O00602 326 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 CRISP2P16562 243 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 GFRALQ6UXV0 394 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 ICE1Q9Y2F5 2266 aa12.28□□□□□ -0.44
HERC2-207ENST00000564734 IGHV1-8P0DP01 117 aa12.27□□□□□ -0.44
HERC2-207ENST00000564734 PAFAH1B2P68402 229 aa12.27□□□□□ -0.44
HERC2-207ENST00000564734 OR5AU1Q8NGC0 362 aa12.27□□□□□ -0.44
HERC2-207ENST00000564734 MS4A10Q96PG2 267 aa12.27□□□□□ -0.44
HERC2-207ENST00000564734 SH3BGRL2Q9UJC5 107 aa12.27□□□□□ -0.44
HERC2-207ENST00000564734 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
HERC2-207ENST00000564734 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
HERC2-207ENST00000564734 SNURFLB1AK76 121 aa12.27□□□□□ -0.45
HERC2-207ENST00000564734 TAS2R60P59551 318 aa12.27□□□□□ -0.45
HERC2-207ENST00000564734 UBE2L3P68036 154 aaKnown RBP12.27□□□□□ -0.45
HERC2-207ENST00000564734 TGIF2LXQ8IUE1 241 aa12.27□□□□□ -0.45
HERC2-207ENST00000564734 ZNF355PQ9NSJ1 428 aa12.27□□□□□ -0.45
HERC2-207ENST00000564734 NAGKQ9UJ70 344 aa12.27□□□□□ -0.45
HERC2-207ENST00000564734 POLR3KQ9Y2Y1 108 aaPredicted RBP12.27□□□□□ -0.45
HERC2-207ENST00000564734 SERF1AO75920 110 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.45
HERC2-207ENST00000564734 FXYD3Q14802 87 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 TMEM136Q6ZRR5 245 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 OR1L4Q8NGR5 311 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 CDC42EP3Q9UKI2 254 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 SPTBN1Q01082 2364 aaKnown RBP12.26□□□□□ -0.45
HERC2-207ENST00000564734 CRYGCP07315 174 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 RNF224P0DH78 156 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 MC5RP33032 325 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 C10orf113Q5VZT2 155 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 Q6ZWC4 215 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 ZNF329Q86UD4 541 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 VSTM5A8MXK1 200 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 SLC25A17O43808 307 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 COX7A2P2O60397 106 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 SCGB1D1O95968 90 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 PYYP10082 97 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 VMA21Q3ZAQ7 101 aa12.26□□□□□ -0.45
HERC2-207ENST00000564734 C2orf88Q9BSF0 95 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms