RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 VMA21Q3ZAQ7 101 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 SPNS3Q6ZMD2 512 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 LINC00518Q8N0U6 118 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 C8orf46Q8TAG6 207 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 SLC35E1Q96K37 410 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 HINT2Q9BX68 163 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 RAB1BQ9H0U4 201 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 PARLQ9H300 379 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 ZNRD1Q9P1U0 126 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 MIOXQ9UGB7 285 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 ARL2-SNX15V9GYD0 113 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 CEP295Q9C0D2 2601 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 TRBV24-1A0A075B6N3 115 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 A0A0A0MQY5 61 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 IGLV1-47P01700 117 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 CTAG1AP78358 180 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 HLA-DRB5Q30154 266 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 GCSAMLQ5JQS6 135 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 ZFP82Q8N141 532 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 TEX45Q8NA69 505 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 RNASEH2CQ8TDP1 164 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 Q8WTZ3 238 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 PATZ1Q9HBE1 687 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 CBLN4Q9NTU7 201 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 DOK5Q9P104 306 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 METTL1Q9UBP6 276 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 NBEAQ8NFP9 2946 aa5.85□□□□□ -1.47
HERPUD1-209ENST00000564678 H0Y8G0 127 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 HOXA3O43365 443 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 IGLV2-23P01705 113 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 IGHV2-5P01817 119 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 RPS10P46783 165 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 SNRPEP62304 92 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 RPL23P62829 140 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 NEU4Q8WWR8 484 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 RPUSD4Q96CM3 377 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 RNF5Q99942 180 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 CLEC7AQ9BXN2 247 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 IGHV2-26A0A0B4J1V2 119 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 PPIAL4CA0A0B4J2A2 164 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 F5H697 171 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 AP4M1O00189 453 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 EIF3GO75821 320 aaKnown RBP eCLIP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 S100A8P05109 93 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 LINC00869P0C866 280 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 ARL14EPLP0DKL9 152 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 PPIAL4GP0DN37 164 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 CD99P14209 185 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 MYOD1P15172 320 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 REG1BP48304 166 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 ADIRFQ15847 76 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 NUDT10Q8NFP7 164 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 OR8B3Q8NGG8 313 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 GATAD1Q8WUU5 269 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 SSMEM1Q8WWF3 244 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 NUDT11Q96G61 164 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 TIMD4Q96H15 378 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 OR8B2Q96RD0 313 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 RNF2Q99496 336 aa5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 AMMECR1Q9Y4X0 333 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-209ENST00000564678 MALRD1Q5VYJ5 2156 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 ADGRG4Q8IZF6 3080 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 BUB1B-PAK6H3BSN5 160 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 CIDEAO60543 219 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 CXCL1P09341 107 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 GCHFRP30047 84 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 COMPP49747 757 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 AKR1D1P51857 326 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 DIAPH2-AS1Q14236 149 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 SSX2Q16385 188 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 ZNF343Q6P1L6 599 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 PQLC2Q6ZP29 291 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 MMD2Q8IY49 270 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 LY6G5BQ8NDX9 201 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 FAM210BQ96KR6 192 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 PYGO2Q9BRQ0 406 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 TCEAL7Q9BRU2 100 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 TMEM167BQ9NRX6 74 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 URGCP-MRPS24S4R325 110 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 SPTA1P02549 2419 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 PFN1P07737 140 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 VPREB1P12018 145 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 DEFA4P12838 97 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 NPPCP23582 126 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 S100PP25815 95 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 TAS2R45P59539 299 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 FAM78BQ5VT40 261 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 PVRIGQ6DKI7 326 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 C11orf71Q6IPW1 123 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 OR10W1Q8NGF6 305 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 OR4P4Q8NGL7 312 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 BTF3L4Q96K17 158 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 OR5B12Q96R08 314 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 CITED1Q99966 193 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 ZNF430Q9H8G1 570 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 TECRQ9NZ01 308 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 FUT9Q9Y231 359 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 INSIG2Q9Y5U4 225 aa5.83□□□□□ -1.48
HERPUD1-209ENST00000564678 IGKV1OR2-108A0A075B7D4 117 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms