RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 BSXQ3C1V8 233 aa14.87□□□□□ -0.03
SHCBP1-203ENST00000564272 ODF3L2Q3SX64 289 aa14.87□□□□□ -0.03
SHCBP1-203ENST00000564272 PYDC2Q56P42 97 aa14.87□□□□□ -0.03
SHCBP1-203ENST00000564272 TRIM63Q969Q1 353 aa14.87□□□□□ -0.03
SHCBP1-203ENST00000564272 TMEM56-RWDD3S4R434 201 aa14.87□□□□□ -0.03
SHCBP1-203ENST00000564272 V9GYH0 126 aa14.87□□□□□ -0.03
SHCBP1-203ENST00000564272 LOC102724200A0A096LPH7 203 aaPredicted RBP14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 CORTO00230 105 aa14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 NXPH3O95157 252 aa14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 OPRK1P41145 380 aa14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 KLF9Q13886 244 aaPredicted RBP14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 TOMM20LQ6UXN7 152 aa14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 OR52E5Q8NH55 327 aa14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 RBM38Q9H0Z9 239 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-203ENST00000564272 TRAV14DV4A0A0A6YYC5 116 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 OR4C46A6NHA9 309 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 TMEM50AO95807 157 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 AKR1C4P17516 323 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 MLANAQ16655 118 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 ZNF600Q6ZNG1 722 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 GALNT14Q96FL9 552 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 SCGB3A2Q96PL1 93 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 ZFAND3Q9H8U3 227 aa14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 PUS1Q9Y606 427 aaKnown RBP eCLIP14.85□□□□□ -0.03
SHCBP1-203ENST00000564272 IGKV3-7A0A075B6H7 116 aa14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 SUPT4H1P63272 117 aaKnown RBP14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 ZNF79Q15937 498 aa14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 IL22RA2Q969J5 263 aa14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 GINS3Q9BRX5 216 aa14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 HEYLQ9NQ87 328 aaPredicted RBP14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 KCNIP3Q9Y2W7 256 aa14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 STARD9Q9P2P6 4700 aa14.84□□□□□ -0.03
SHCBP1-203ENST00000564272 A0A1B0GU03 582 aa14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 CEBPZOSA8MTT3 80 aa14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 CLN5O75503 358 aa14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 APOHP02749 345 aaPredicted RBP14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 HTR2BP41595 481 aa14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 TFPI2P48307 235 aa14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 TOMM5Q8N4H5 51 aa14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 ST8SIA2Q92186 375 aa14.83□□□□□ -0.04
SHCBP1-203ENST00000564272 DYNC2H1Q8NCM8 4307 aaKnown RBP14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 IGHV3-66A0A0C4DH42 116 aa14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 SULT1A3P0DMM9 295 aa14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 SULT1A4P0DMN0 295 aa14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 S100A5P33763 92 aa14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 FAUP35544 74 aaKnown RBP14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 LYZL2Q7Z4W2 148 aa14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 SLC24A4Q8NFF2 622 aa14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 OR4X1Q8NH49 305 aa14.82□□□□□ -0.04
SHCBP1-203ENST00000564272 CSMD3Q7Z407 3707 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 AP3S2P59780 193 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 C2orf83Q53S99 150 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 NMSQ5H8A3 153 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 FAM90A2PQ658T7 463 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 TCF24Q7RTU0 167 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 TMED4Q7Z7H5 227 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 CCDC190Q86UF4 302 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 LILRB2Q8N423 598 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 GBGT1Q8N5D6 347 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 TMEM170AQ8WVE7 144 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 OVOL2Q9BRP0 275 aa14.81□□□□□ -0.04
SHCBP1-203ENST00000564272 A0A0B4J2A0 478 aa14.8□□□□□ -0.04
SHCBP1-203ENST00000564272 RPS10-NUDT3A0A1W2PQS6 291 aa14.8□□□□□ -0.04
SHCBP1-203ENST00000564272 ZNF124Q15973 351 aa14.8□□□□□ -0.04
SHCBP1-203ENST00000564272 TIGITQ495A1 244 aa14.8□□□□□ -0.04
SHCBP1-203ENST00000564272 APRG1Q8IVJ8 170 aa14.8□□□□□ -0.04
SHCBP1-203ENST00000564272 VSIRQ9H7M9 311 aa14.8□□□□□ -0.04
SHCBP1-203ENST00000564272 SHPKQ9UHJ6 478 aa14.8□□□□□ -0.04
SHCBP1-203ENST00000564272 IGKV1-17P01599 117 aa14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 ANXA3P12429 323 aa14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 RPL35AP18077 110 aaKnown RBP14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 BMI1P35226 326 aa14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 APOC4P55056 127 aa14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 SMCO1Q147U7 214 aa14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 LGI3Q8N145 548 aa14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 TENM2Q9NT68 2774 aa14.79□□□□□ -0.04
SHCBP1-203ENST00000564272 SCGB2A1O75556 95 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 DFFBO76075 338 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 NPY1RP25929 384 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 CCR6P51684 374 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 RND2P52198 227 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 SRPXP78539 464 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 TNFRSF9Q07011 255 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 PRSS54Q6PEW0 395 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 RNASEH2CQ8TDP1 164 aaKnown RBP14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 HSPB7Q9UBY9 170 aa14.78□□□□□ -0.04
SHCBP1-203ENST00000564272 ZNF701M0R085 212 aaPredicted RBP14.77□□□□□ -0.05
SHCBP1-203ENST00000564272 IGLC1P0CG04 106 aa14.77□□□□□ -0.05
SHCBP1-203ENST00000564272 DEFB135Q30KP9 77 aa14.77□□□□□ -0.05
SHCBP1-203ENST00000564272 WFDC3Q8IUB2 231 aa14.77□□□□□ -0.05
SHCBP1-203ENST00000564272 RBKSQ9H477 322 aa14.77□□□□□ -0.05
SHCBP1-203ENST00000564272 MAP6D1Q9H9H5 199 aa14.77□□□□□ -0.05
SHCBP1-203ENST00000564272 RYR2Q92736 4967 aa14.76□□□□□ -0.05
SHCBP1-203ENST00000564272 IFNA10P01566 189 aa14.76□□□□□ -0.05
SHCBP1-203ENST00000564272 SLC25A4P12235 298 aa14.76□□□□□ -0.05
SHCBP1-203ENST00000564272 VAMP1P23763 118 aa14.76□□□□□ -0.05
SHCBP1-203ENST00000564272 OR1S2Q8NGQ3 325 aa14.76□□□□□ -0.05
SHCBP1-203ENST00000564272 DTD1Q8TEA8 209 aa14.76□□□□□ -0.05
SHCBP1-203ENST00000564272 METTL26Q96S19 204 aa14.76□□□□□ -0.05
SHCBP1-203ENST00000564272 SRRQ9GZT4 340 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms