RNA–Protein interactions for RNA: ENST00000564216.5

CSK-206, Transcript of C-terminal Src kinase, human

TSL 3

Gene CSK, Length 978 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-206	ENST00000564216	SMCO1	Q147U7	214 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216	C2orf83	Q53S99	150 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216	BTNL8	Q6UX41	500 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216	TMED4	Q7Z7H5	227 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216	OR4X1	Q8NH49	305 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.99	□□□□□ -0.49
CSK-206	ENST00000564216	WDR89	Q96FK6	387 aa	Predicted RBP	11.99	□□□□□ -0.49
CSK-206	ENST00000564216	SPAG8	Q99932	426 aa	Predicted RBP	11.99	□□□□□ -0.49
CSK-206	ENST00000564216	C7orf50	Q9BRJ6	194 aa	Known RBP	11.99	□□□□□ -0.49
CSK-206	ENST00000564216	TM2D3	Q9BRN9	247 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216	C20orf24	Q9BUV8	137 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216		U3KQ87	197 aa		11.99	□□□□□ -0.49
CSK-206	ENST00000564216	TRAV30	A0A087WSZ9	112 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	CEBPZOS	A8MTT3	80 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	TSPAN4	O14817	238 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	YIF1A	O95070	293 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	SLC25A6	P12236	298 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	BMI1	P35226	326 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	OPRK1	P41145	380 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	LINC00299	Q6ZSB3	139 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	LYZL2	Q7Z4W2	148 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	CENPS	Q8N2Z9	138 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	GINS3	Q9BRX5	216 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	HSPB7	Q9UBY9	170 aa		11.98	□□□□□ -0.49
CSK-206	ENST00000564216	TRAV14DV4	A0A0A6YYC5	116 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	OR11H12	B2RN74	326 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	CLN5	O75503	358 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	TMEM50A	O95807	157 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	SLC25A4	P12235	298 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	TNFRSF9	Q07011	255 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	BAK1	Q16611	211 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	CNPY1	Q3B7I2	92 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	ETFRF1	Q6IPR1	90 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	ZNF600	Q6ZNG1	722 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	SLC24A4	Q8NFF2	622 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	OR52B4	Q8NGK2	314 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	RCHY1	Q96PM5	261 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	SMPX	Q9UHP9	88 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	TMED3	Q9Y3Q3	217 aa		11.97	□□□□□ -0.49
CSK-206	ENST00000564216	IGHV7-4-1	A0A0J9YVY3	117 aa		11.96	□□□□□ -0.49
CSK-206	ENST00000564216	SFT2D2	O95562	160 aa		11.96	□□□□□ -0.49
CSK-206	ENST00000564216	CD7	P09564	240 aa		11.96	□□□□□ -0.49
CSK-206	ENST00000564216	VAMP1	P23763	118 aa		11.96	□□□□□ -0.49
CSK-206	ENST00000564216	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.96	□□□□□ -0.49
CSK-206	ENST00000564216	TMEM116	Q8NCL8	245 aa		11.96	□□□□□ -0.49
CSK-206	ENST00000564216	SPATA25	Q9BR10	227 aa		11.96	□□□□□ -0.49
CSK-206	ENST00000564216	FAM90A26	D6RGX4	464 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	SCAF4	O95104	1147 aa	Known RBP	11.95	□□□□□ -0.5
CSK-206	ENST00000564216	NDUFB6	O95139	128 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	IGHV3-48	P01763	117 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	NPY1R	P25929	384 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	HAGH	Q16775	308 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	TOMM20L	Q6UXN7	152 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	DTD1	Q8TEA8	209 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	FAM110A	Q9BQ89	295 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.95	□□□□□ -0.5
CSK-206	ENST00000564216	PRR13	Q9NZ81	148 aa		11.95	□□□□□ -0.5
CSK-206	ENST00000564216	OR4C46	A6NHA9	309 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	CHEK1	O14757	476 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	PITX3	O75364	302 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	CMC4	P56277	68 aa	Predicted RBP	11.94	□□□□□ -0.5
CSK-206	ENST00000564216	PPP1R1A	Q13522	171 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	DEFB125	Q8N687	156 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	OR1S1	Q8NH92	325 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	ZNF414	Q96IQ9	312 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	SDHC	Q99643	169 aa	Predicted RBP	11.94	□□□□□ -0.5
CSK-206	ENST00000564216	RHPN1-AS1	Q9BWJ2	59 aa		11.94	□□□□□ -0.5
CSK-206	ENST00000564216	MED6	O75586	246 aa		11.93	□□□□□ -0.5
CSK-206	ENST00000564216	IFNA10	P01566	189 aa		11.93	□□□□□ -0.5
CSK-206	ENST00000564216	IL7	P13232	177 aa		11.93	□□□□□ -0.5
CSK-206	ENST00000564216	OR1S2	Q8NGQ3	325 aa		11.93	□□□□□ -0.5
CSK-206	ENST00000564216	TMEM231	Q9H6L2	316 aa		11.93	□□□□□ -0.5
CSK-206	ENST00000564216	SRD5A3	Q9H8P0	318 aa		11.93	□□□□□ -0.5
CSK-206	ENST00000564216	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CSK-206	ENST00000564216	IGHV3OR16-8	A0A075B7F1	116 aa		11.92	□□□□□ -0.5
CSK-206	ENST00000564216	ZNF207	O43670	478 aa	Known RBP	11.92	□□□□□ -0.5
CSK-206	ENST00000564216	GPX4	P36969	197 aa	Predicted RBP	11.92	□□□□□ -0.5
CSK-206	ENST00000564216	PAFAH1B2	P68402	229 aa		11.92	□□□□□ -0.5
CSK-206	ENST00000564216	PRSS54	Q6PEW0	395 aa		11.92	□□□□□ -0.5
CSK-206	ENST00000564216	CIB3	Q96Q77	187 aa	Predicted RBP	11.92	□□□□□ -0.5
CSK-206	ENST00000564216	RNF2	Q99496	336 aa		11.92	□□□□□ -0.5
CSK-206	ENST00000564216	RBKS	Q9H477	322 aa		11.92	□□□□□ -0.5
CSK-206	ENST00000564216	VSIR	Q9H7M9	311 aa		11.92	□□□□□ -0.5
CSK-206	ENST00000564216	ZFAND3	Q9H8U3	227 aa		11.92	□□□□□ -0.5
CSK-206	ENST00000564216		A0A1W2PS18	150 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	IGKV1-17	P01599	117 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	NPPC	P23582	126 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	YPEL3	P61236	119 aa	Predicted RBP	11.91	□□□□□ -0.5
CSK-206	ENST00000564216	RPP30	P78346	268 aa	Known RBP	11.91	□□□□□ -0.5
CSK-206	ENST00000564216	MLANA	Q16655	118 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	COQ8A	Q8NI60	647 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216		Q8WTZ3	238 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	TMEM170A	Q8WVE7	144 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	NARS2	Q96I59	477 aa	Known RBP	11.91	□□□□□ -0.5
CSK-206	ENST00000564216	METTL26	Q96S19	204 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	CCDC32	Q9BV29	185 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	DNAH7	Q8WXX0	4024 aa		11.91	□□□□□ -0.5
CSK-206	ENST00000564216	C9orf170	A2RU37	121 aa		11.9	□□□□□ -0.5
CSK-206	ENST00000564216	RBMY1B	A6NDE4	496 aa	Known RBP	11.9	□□□□□ -0.5
CSK-206	ENST00000564216	RBMY1E	A6NEQ0	496 aa	Known RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms