RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 DEFB114Q30KQ6 69 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 FAM106AQ4KMX7 169 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 C4orf46Q504U0 113 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 Q56UQ5 140 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 SPSB3Q6PJ21 355 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 UBAC2Q8NBM4 344 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 SLC24A4Q8NFF2 622 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 OR1S1Q8NH92 325 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 DTD1Q8TEA8 209 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 MITD1Q8WV92 249 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 TMEM190Q8WZ59 177 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 NUDT15Q9NV35 164 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 PGPEP1Q9NXJ5 209 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 PEMTQ9UBM1 199 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 ZMAT5Q9UDW3 170 aaKnown RBP6.46□□□□□ -1.38
UBR1-204ENST00000563239 CACFD1Q9UGQ2 172 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 FAM240BA0A1B0GVZ2 78 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 ZNF320A2RRD8 509 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 ZNF785A8K8V0 405 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 FAM90A26D6RGX4 464 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 J3QL48 77 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 NDUFA4O00483 81 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 TMEM50AO95807 157 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 H2AFB2P0C5Z0 115 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 GP9P14770 177 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 NPY1RP25929 384 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 ELLP55199 621 aaPredicted RBP6.45□□□□□ -1.38
UBR1-204ENST00000563239 ID3Q02535 119 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 CD300EQ496F6 205 aaPredicted RBP6.45□□□□□ -1.38
UBR1-204ENST00000563239 PRSS54Q6PEW0 395 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 Q8N1Y9 231 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 OR4D5Q8NGN0 318 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 OR4X1Q8NH49 305 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 COQ8AQ8NI60 647 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
UBR1-204ENST00000563239 OR10C1Q96KK4 312 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 SEC22CQ9BRL7 303 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 HIPK2Q9H2X6 1198 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 MLXQ9UH92 298 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 SELENOKQ9Y6D0 94 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 U3KQ87 197 aa6.45□□□□□ -1.38
UBR1-204ENST00000563239 IGHV3OR16-8A0A075B7F1 116 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 C15orf62A8K5M9 175 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 CORTO00230 105 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 CLN5O75503 358 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 IGKV1-17P01599 117 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 IAPPP10997 89 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 OPRK1P41145 380 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 NPBWR1P48145 328 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 DEFB121Q5J5C9 76 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 MZT2BQ6NZ67 158 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 NRARPQ7Z6K4 114 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 UXS1Q8NBZ7 420 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 DUSP18Q8NEJ0 188 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 OR2K2Q8NGT1 345 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 ZNF431Q8TF32 576 aaPredicted RBP6.44□□□□□ -1.38
UBR1-204ENST00000563239 MAGT1Q9H0U3 335 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 ZFAND3Q9H8U3 227 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 GAR1Q9NY12 217 aaKnown RBP6.44□□□□□ -1.38
UBR1-204ENST00000563239 SORL1Q92673 2214 aa6.44□□□□□ -1.38
UBR1-204ENST00000563239 PRSS46E5RG02 174 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 K7EMT4 169 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 NUPL2O15504 423 aaKnown RBP6.43□□□□□ -1.38
UBR1-204ENST00000563239 ZNF207O43670 478 aaKnown RBP6.43□□□□□ -1.38
UBR1-204ENST00000563239 SYNGR2O43760 224 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 GNG7O60262 68 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 LY86O95711 162 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 IFNA10P01566 189 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 IL5P05113 134 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 PAX9P55771 341 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 ATP5IP56385 69 aaPredicted RBP6.43□□□□□ -1.38
UBR1-204ENST00000563239 POLR2GP62487 172 aaKnown RBP eCLIP6.43□□□□□ -1.38
UBR1-204ENST00000563239 CD69Q07108 199 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 BTNL8Q6UX41 500 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 TOMM20LQ6UXN7 152 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 ZBTB8BQ8NAP8 495 aaPredicted RBP6.43□□□□□ -1.38
UBR1-204ENST00000563239 TMEM116Q8NCL8 245 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 MARC2Q969Z3 335 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 PALMDQ9NP74 551 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 TECRQ9NZ01 308 aaKnown RBP6.43□□□□□ -1.38
UBR1-204ENST00000563239 MRPL27Q9P0M9 148 aaKnown RBP6.43□□□□□ -1.38
UBR1-204ENST00000563239 UFC1Q9Y3C8 167 aa6.43□□□□□ -1.38
UBR1-204ENST00000563239 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
UBR1-204ENST00000563239 WRBO00258 174 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 CCSO14618 274 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 IFNA21P01568 189 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 IGLC1P0CG04 106 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 SLC25A4P12235 298 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 RND2P52198 227 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 RELQ04864 619 aaPredicted RBP6.42□□□□□ -1.38
UBR1-204ENST00000563239 IAH1Q2TAA2 248 aaPredicted RBP6.42□□□□□ -1.38
UBR1-204ENST00000563239 TIGITQ495A1 244 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 LCN12Q6JVE5 192 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 ZNF600Q6ZNG1 722 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 SLC16A13Q7RTY0 426 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 TMEM61Q8N0U2 210 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 C12orf45Q8N5I9 185 aaPredicted RBP6.42□□□□□ -1.38
UBR1-204ENST00000563239 WDR89Q96FK6 387 aaPredicted RBP6.42□□□□□ -1.38
UBR1-204ENST00000563239 C20orf24Q9BUV8 137 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 DAZ1Q9NQZ3 744 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms