RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OR10G4Q8NGN3 311 aa14.27□□□□□ -0.12
COMMD4-208ENST00000563220 OR10G9Q8NGN4 311 aa14.27□□□□□ -0.12
COMMD4-208ENST00000563220 OR10G7Q8NGN6 311 aa14.27□□□□□ -0.12
COMMD4-208ENST00000563220 HSPB9Q9BQS6 159 aa14.27□□□□□ -0.12
COMMD4-208ENST00000563220 ZANQ9Y493 2812 aa14.27□□□□□ -0.12
COMMD4-208ENST00000563220 ZFHX3Q15911 3703 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 YIF1AO95070 293 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 MBP02144 154 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 FBP1P09467 338 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 CIARTQ8N365 385 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-208ENST00000563220 MBD3L1Q8WWY6 194 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 ACY3Q96HD9 319 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 SLC35E1Q96K37 410 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 RBM14Q96PK6 669 aaKnown RBP14.27□□□□□ -0.13
COMMD4-208ENST00000563220 SLC25A33Q9BSK2 321 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 SMCO4Q9NRQ5 59 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 PXMP4Q9Y6I8 212 aa14.27□□□□□ -0.13
COMMD4-208ENST00000563220 PDZD2O15018 2839 aa14.26□□□□□ -0.13
COMMD4-208ENST00000563220 BTBD17A6NE02 478 aa14.26□□□□□ -0.13
COMMD4-208ENST00000563220 SH2D7A6NKC9 451 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-208ENST00000563220 CRYGCP07315 174 aa14.26□□□□□ -0.13
COMMD4-208ENST00000563220 DEFA4P12838 97 aa14.26□□□□□ -0.13
COMMD4-208ENST00000563220 NPIPB3Q92617 1050 aa14.26□□□□□ -0.13
COMMD4-208ENST00000563220 MLXQ9UH92 298 aa14.26□□□□□ -0.13
COMMD4-208ENST00000563220 IGHV3-21A0A0B4J1V1 117 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 RPL29P47914 159 aaKnown RBP14.25□□□□□ -0.13
COMMD4-208ENST00000563220 PPT1P50897 306 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 RAB31Q13636 194 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 CYB5R2Q6BCY4 276 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 LCN15Q6UWW0 184 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 BCL6BQ8N143 479 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-208ENST00000563220 C5orf56Q8N8D9 126 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 SLC45A2Q9UMX9 530 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 TRAV1-1A0A0B4J248 108 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 MDFIC2A0A1B0GVS7 189 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 FOLR2P14207 255 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 OR10J1P30954 320 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 B2MP61769 119 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 ACOT6Q3I5F7 207 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-208ENST00000563220 STPG3Q8N7X2 389 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 UNC79Q9P2D8 2635 aa14.25□□□□□ -0.13
COMMD4-208ENST00000563220 CSPG4Q6UVK1 2322 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 LINC01548A6NM66 108 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 H3BUX3 64 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 MT-CO2P00403 227 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 AMY1AP04745 511 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 LINC00869P0C866 280 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 GATA2P23769 480 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-208ENST00000563220 PRR20EP86478 221 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 PRR20CP86479 221 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 PRR20DP86480 221 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 PRR20BP86481 221 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 PRR20AP86496 221 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 LY6EQ16553 131 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 C15orf54Q8N8G6 183 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 C22orf15Q8WYQ4 148 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 SLC35B3Q9H1N7 401 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 TUBA4BQ9H853 241 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 SLC25A22Q9H936 323 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 SLC39A9Q9NUM3 307 aa14.24□□□□□ -0.13
COMMD4-208ENST00000563220 IGKV1D-37A0A075B6S9 117 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 COLCA2A8K830 154 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 NPIPB5A8MRT5 1133 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 CORTO00230 105 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 SOX15O60248 233 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 FSHBP01225 129 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 RND2P52198 227 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 FGF8P55075 233 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-208ENST00000563220 ETFRF1Q6IPR1 90 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 TTC9CQ8N5M4 171 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 EIF5A2Q9GZV4 153 aaKnown RBP14.23□□□□□ -0.13
COMMD4-208ENST00000563220 MOB4Q9Y3A3 225 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 CREBBPQ92793 2442 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 FASNP49327 2511 aaKnown RBP14.23□□□□□ -0.13
COMMD4-208ENST00000563220 A6NDX4 124 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 I3L2K1 104 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 HMGB3O15347 200 aaKnown RBP14.23□□□□□ -0.13
COMMD4-208ENST00000563220 HBE1P02100 147 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 BPIFB3P59826 476 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 DEFB112Q30KQ8 113 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 RAB24Q969Q5 203 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 FOXC2Q99958 501 aa14.23□□□□□ -0.13
COMMD4-208ENST00000563220 ACTR3CQ9C0K3 210 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-208ENST00000563220 ZNF469Q96JG9 3925 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-208ENST00000563220 CTXND1A0A1B0GTU2 59 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 MAP1LC3B2A6NCE7 125 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 CYB5BO43169 146 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 ITPR2Q14571 2701 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 THAP8Q8NA92 274 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 CCDC168Q8NDH2 2452 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 NANPQ8TBE9 248 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 RXFP4Q8TDU9 374 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 FANCD2OSQ96PS1 177 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 MAP1LC3BQ9GZQ8 125 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 KCNIP2Q9NS61 270 aa14.22□□□□□ -0.13
COMMD4-208ENST00000563220 SMAD7O15105 426 aaKnown RBP14.21□□□□□ -0.13
COMMD4-208ENST00000563220 ATP6V0E1O15342 81 aa14.21□□□□□ -0.13
COMMD4-208ENST00000563220 TMEM116Q8NCL8 245 aa14.21□□□□□ -0.13
COMMD4-208ENST00000563220 OR5T1Q8NG75 326 aa14.21□□□□□ -0.13
COMMD4-208ENST00000563220 SGMS2Q8NHU3 365 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms