RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ATG2BQ96BY7 2078 aa1.62□□□□□ -2.15
SHCBP1-202ENST00000563219 KIF1BO60333 1816 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 ANKRD36BQ8N2N9 1353 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 BICRAQ9NZM4 1560 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 OVOS2A0A0J9YW53 1432 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 OVOS2Q6IE36 1432 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 SETD5Q9C0A6 1442 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 ZNF407Q9C0G0 2248 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 MEIKINA0A087WXM9 373 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A0J9YX75 114 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 TMEM218A2RU14 115 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 EEF1E1-BLOC1S5C9J1V9 151 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 G3V3Q6 166 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 H7C1C5 153 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 I3L521 148 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 J3KT08 172 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 AIPO00170 330 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 GNG7O60262 68 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 IGHV1-69P01742 117 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 TTRP02766 147 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 OR5G3P0C626 314 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 NPPCP23582 126 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 COL8A2P25067 703 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 GZMMP51124 257 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 RAB5CP51148 216 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 COPZ1P61923 177 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 LCN6P62502 163 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 RPS28P62857 69 aaKnown RBP1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 RPL30P62888 115 aaKnown RBP1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 GNG5P63218 68 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 PMAIP1Q13794 54 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 OR8B8Q15620 311 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 OCIAD2Q56VL3 154 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 FAM201AQ5SY85 155 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 TEX261Q6UWH6 196 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 GOLT1AQ6ZVE7 132 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 DEFB128Q7Z7B8 93 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 OOSP2Q86WS3 158 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 GPHB5Q86YW7 130 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 TCTEX1D1Q8N7M0 179 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 OR13C8Q8NGS7 320 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 FNDC9Q8TBE3 224 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 GPR119Q8TDV5 335 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 NAT14Q8WUY8 206 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 CCDC115Q96NT0 180 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 SMIM3Q9BZL3 60 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 LINC00470Q9BZP3 86 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 NKX6-2Q9C056 277 aaPredicted RBP1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 SH3BGRL3Q9H299 93 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 SMDT1Q9H4I9 107 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 CACYBPQ9HB71 228 aaKnown RBP1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 ACER3Q9NUN7 267 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 MED29Q9NX70 200 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 IDI2-AS1Q9NZ38 188 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 RSL24D1Q9UHA3 163 aaKnown RBP1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 RAPGEF2Q9Y4G8 1499 aa1.61□□□□□ -2.15
SHCBP1-202ENST00000563219 CCDC88AQ3V6T2 1871 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 LTBP4Q8N2S1 1624 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 TRAV30A0A087WSZ9 112 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 PNMA8CA0A1B0GUJ8 204 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 hADV38S2A0JD32 116 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 DHRS12A0PJE2 317 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 OR4C45A6NMZ5 311 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 C1orf196B1AJZ1 125 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 C3orf84H3BNL1 204 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 CORTO00230 105 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 APOMO95445 188 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 FGF6P10767 208 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 EVI2AP22794 236 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 CCR2P41597 374 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 GABRA2P47869 451 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 MARCKSL1P49006 195 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 EVX1P49640 407 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 NCS1P62166 190 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 HBA1P69905 142 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 IAH1Q2TAA2 248 aaPredicted RBP1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 SCGB2B2Q4G0G5 96 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 COL5A1-AS1Q5SY13 56 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 NCMAPQ5T1S8 102 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 ALKAL1Q6UXT8 129 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 TMEM86BQ8N661 226 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 OR11H6Q8NGC7 330 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 OR5A2Q8NGI9 324 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 SGMS2Q8NHU3 365 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 JOSD2Q8TAC2 188 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 ACOT12Q8WYK0 555 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 SLC7A6Q92536 515 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 MALSU1Q96EH3 234 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 PSMG3Q9BT73 122 aaPredicted RBP1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 LPAR5Q9H1C0 372 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 CST9LQ9H4G1 147 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 TAF9BQ9HBM6 251 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 POPDC3Q9HBV1 291 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 GPR84Q9NQS5 396 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 PRTFDC1Q9NRG1 225 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 TAAR3PQ9P1P4 343 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 ERG28Q9UKR5 140 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 PRNDQ9UKY0 176 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 LAMTOR2Q9Y2Q5 125 aa1.6□□□□□ -2.15
SHCBP1-202ENST00000563219 V9GYS6 101 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms