RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SIGLEC8Q9NYZ4 499 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 PRKDCP78527 4128 aaKnown RBP4.72□□□□□ -1.65
CNOT1-204ENST00000563130 LGALS9O00182 355 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 OR2C1O95371 312 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 ARL3P36405 182 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 SNCAP37840 140 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 MITD1Q8WV92 249 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF414Q96IQ9 312 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 NUDT15Q9NV35 164 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 C21orf62Q9NYP8 219 aa4.71□□□□□ -1.65
CNOT1-204ENST00000563130 FAM240BA0A1B0GVZ2 78 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 FAM90A26D6RGX4 464 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 CORTO00230 105 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 UBE2CO00762 179 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 MT-CO2P00403 227 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 GPR183P32249 361 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 HTR2BP41595 481 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 HOXA1P49639 335 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-204ENST00000563130 C2orf83Q53S99 150 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 GGNBP1Q5YKI7 109 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 DUSP18Q8NEJ0 188 aa4.71□□□□□ -1.66
CNOT1-204ENST00000563130 BSCL2Q96G97 398 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-204ENST00000563130 AURKAIP1Q9NWT8 199 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-204ENST00000563130 TRAV6A0A075B6T7 132 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 IGHV3-21A0A0B4J1V1 117 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 MPTX1A8MV57 137 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 A8MWP6 167 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF561-AS1K7EIQ3 104 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 TGOLN2O43493 480 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 SAP30O75446 220 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ADAP1O75689 374 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 IGLV1-51P01701 117 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 PRB2P02812 416 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-204ENST00000563130 CSN3P07498 182 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 CTSGP08311 255 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 HOXB5P09067 269 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 SUB1P53999 127 aaKnown RBP eCLIP4.7□□□□□ -1.663e-6■■□□□ 12.5
CNOT1-204ENST00000563130 TATDN3Q17R31 274 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 C11orf87Q6NUJ2 197 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 SPSB3Q6PJ21 355 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ADAMTSL5Q6ZMM2 481 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 SLC24A4Q8NFF2 622 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 OR52B4Q8NGK2 314 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 COQ8AQ8NI60 647 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 TXN2Q99757 166 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 CHRDL1Q9BU40 450 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ELOVL1Q9BW60 279 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF436Q9C0F3 470 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-204ENST00000563130 FNDC4Q9H6D8 234 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ENY2Q9NPA8 101 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 HEYLQ9NQ87 328 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-204ENST00000563130 OR2T8A6NH00 312 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 CEBPZOSA8MTT3 80 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 NXPH3O95157 252 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 MFAP4P55083 255 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ATP5IP56385 69 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF674Q2M3X9 581 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 PLET1Q6UQ28 207 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 UNQ9165/PRO28630Q6UXU0 137 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 NRARPQ7Z6K4 114 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 OR1S1Q8NH92 325 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 DTD1Q8TEA8 209 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 OR4C12Q96R67 309 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 HIPK2Q9H2X6 1198 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 RBKSQ9H477 322 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 GAR1Q9NY12 217 aaKnown RBP4.7□□□□□ -1.66
CNOT1-204ENST00000563130 PEMTQ9UBM1 199 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 ZMAT5Q9UDW3 170 aaKnown RBP4.7□□□□□ -1.66
CNOT1-204ENST00000563130 U3KQ87 197 aa4.7□□□□□ -1.66
CNOT1-204ENST00000563130 WI2-2373I1.2A0A1W2PRP0 233 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 TMEM213A2RRL7 107 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 BOLA2-SMG1P6H3BVE0 249 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 K7EIL1 84 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 SCGB1D1O95968 90 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 IL5P05113 134 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 FAM106AQ4KMX7 169 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 OR4D5Q8NGN0 318 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 RNASEH2CQ8TDP1 164 aaKnown RBP4.69□□□□□ -1.66
CNOT1-204ENST00000563130 ZNF431Q8TF32 576 aaPredicted RBP4.69□□□□□ -1.66
CNOT1-204ENST00000563130 TMEM190Q8WZ59 177 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 PINX1Q96BK5 328 aaKnown RBP4.69□□□□□ -1.66
CNOT1-204ENST00000563130 RNF125Q96EQ8 232 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 OR10C1Q96KK4 312 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 SEPSECSQ9HD40 501 aaKnown RBP4.69□□□□□ -1.66
CNOT1-204ENST00000563130 ZC4H2Q9NQZ6 224 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 MRPL36Q9P0J6 103 aaKnown RBP4.69□□□□□ -1.66
CNOT1-204ENST00000563130 C2orf70A6NJV1 201 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 NDUFA4O00483 81 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 SYNGR2O43760 224 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 IGHV3-48P01763 117 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 C8orf88P0DMB2 117 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 EDN2P20800 178 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 CBLN1P23435 193 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 NPY1RP25929 384 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 NPBWR1P48145 328 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 ELLP55199 621 aaPredicted RBP4.69□□□□□ -1.66
CNOT1-204ENST00000563130 Q56UQ5 140 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 TMEM116Q8NCL8 245 aa4.69□□□□□ -1.66
CNOT1-204ENST00000563130 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms