RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 ADGRG4Q8IZF6 3080 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 IGKV1D-37A0A075B6S9 117 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 MDFIC2A0A1B0GVS7 189 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 A0A1W2PRE2 83 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 TMEM8BA6NDV4 472 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 ZNF98A6NK75 572 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 A6NNC1 897 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 ODF3BA8MYP8 253 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 OR4X1Q8NH49 305 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 ZNF503Q96F45 646 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 TRGV9Q99603 122 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 UBTD1Q9HAC8 227 aa17.08■□□□□ 0.33
VPS9D1-AS1-202ENST00000562866 TEX22C9J3V5 150 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 MEOX2P50222 304 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 SSBP2P81877 361 aaPredicted RBP17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 OR2T10Q8NGZ9 312 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 TNFRSF19Q9NS68 423 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 ELOA3CA0A087WX78 387 aaPredicted RBP17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 PPP5D1E7EU14 171 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BKO60814 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 GGCTO75223 188 aaKnown RBP17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BJP06899 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 GNLYP22749 145 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BOP23527 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BBP33778 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BDP58876 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BCP62807 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST2H2BEQ16778 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 SRSF12Q8WXF0 261 aaKnown RBP17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BHQ93079 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 SFRP2Q96HF1 295 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 C12orf57Q99622 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BNQ99877 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HIST1H2BMQ99879 126 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 SLC25A2Q9BXI2 301 aa17.07■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 A0A1W2PPR1 153 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 S100A9P06702 114 aaKnown RBP17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HOXA5P20719 270 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 CDKN1AP38936 164 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 EFNA4P52798 201 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 MFAP2P55001 183 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 NDUFA6P56556 154 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 TMEM116Q8NCL8 245 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 FAM167A-AS1Q96KT0 104 aa17.06■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 TRBV20OR9-2A0A075B6H5 130 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 OOSP1A8MZH6 123 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 MOSP00540 346 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 LCN2P80188 198 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 ZNF90Q03938 601 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 MMDQ15546 238 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 LDLRAD2Q5SZI1 272 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 CCDC144NLQ6NUI1 221 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 CFHR4Q92496 578 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 ELOVL1Q9BW60 279 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 MRPL36Q9P0J6 103 aaKnown RBP17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 NBR2O15453 112 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 IGHV3-48P01763 117 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 SMIM6P0DI80 62 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 UQCRFS1P47985 274 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 FAM3BP58499 235 aaPredicted RBP17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 UBE2L3P68036 154 aaKnown RBP17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 NPBQ8NG41 125 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 OR5AU1Q8NGC0 362 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 OCC1Q8TAD7 63 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HILPDAQ9Y5L2 63 aa17.05■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 A0A1W2PPQ1 181 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 CNIH1O95406 144 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 TYMSP04818 313 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 KLRD1Q13241 179 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 STXBP6Q8NFX7 210 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 FRZBQ92765 325 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 PERPQ96FX8 193 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 ZNF355PQ9NSJ1 428 aa17.04■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 HELTA6NFD8 242 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 OR10J4P0C629 311 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 TRGC1P0CF51 173 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 FOXL1Q12952 345 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 MINOS1Q5TGZ0 78 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 OR10G8Q8NGN5 311 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 OR1L6Q8NGR2 347 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 PAXXQ9BUH6 204 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 AURKAIP1Q9NWT8 199 aaPredicted RBP17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 MINOS1-NBL1R4GNA1 71 aa17.03■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 PGPEP1LA6NFU8 196 aa17.02■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 FCN1O00602 326 aa17.02■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 KALRNO60229 2985 aa17.02■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 NDUFA3O95167 84 aa17.02■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 CDX1P47902 265 aaPredicted RBP17.02■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 PATE2Q6UY27 113 aa17.02■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 VMO1Q7Z5L0 202 aa17.02■□□□□ 0.32
VPS9D1-AS1-202ENST00000562866 TRAV5A0A0B4J249 113 aa17.02■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 PHOX2AO14813 284 aa17.02■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 CRYBB3P26998 211 aa17.02■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 GNG4P50150 75 aa17.02■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 TEX38Q6PEX7 206 aa17.02■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 EAF1Q96JC9 268 aaPredicted RBP17.02■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 OR51M1Q9H341 326 aa17.02■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 GGTLC3B5MD39 225 aa17.01■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 APELAP0DMC3 54 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms