RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CTSGP08311 255 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 OR4E1P0C645 316 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 CBLN1P23435 193 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 ADMP35318 185 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 NPBWR1P48145 328 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 RELQ04864 619 aaPredicted RBP12.53□□□□□ -0.4
CDT1-202ENST00000562747 C2orf83Q53S99 150 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 SLC24A4Q8NFF2 622 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 OR1S1Q8NH92 325 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 MUC7Q8TAX7 377 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 TMEM190Q8WZ59 177 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 MARC2Q969Z3 335 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 SMAD5-AS1Q9Y6J3 95 aa12.53□□□□□ -0.4
CDT1-202ENST00000562747 DNAH1Q9P2D7 4330 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 GNG7O60262 68 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 PITX3O75364 302 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 EDN2P20800 178 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 OPRK1P41145 380 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 DHRS2Q13268 280 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 CD300EQ496F6 205 aaPredicted RBP12.52□□□□□ -0.41
CDT1-202ENST00000562747 LYG2Q86SG7 212 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 NOXA1Q86UR1 476 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.41
CDT1-202ENST00000562747 MRPL27Q9P0M9 148 aaKnown RBP12.52□□□□□ -0.41
CDT1-202ENST00000562747 STARD9Q9P2P6 4700 aa12.52□□□□□ -0.41
CDT1-202ENST00000562747 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 FAM90A26D6RGX4 464 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 IGHV3-48P01763 117 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 C8orf88P0DMB2 117 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 ANXA7P20073 488 aaKnown RBP12.51□□□□□ -0.41
CDT1-202ENST00000562747 ZNF846Q147U1 533 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 TM4SF20Q53R12 229 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 COQ8AQ8NI60 647 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
CDT1-202ENST00000562747 DTD1Q8TEA8 209 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 CACNG8Q8WXS5 425 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 C20orf85Q9H1P6 137 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 RBKSQ9H477 322 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 DAZ1Q9NQZ3 744 aaKnown RBP12.51□□□□□ -0.41
CDT1-202ENST00000562747 U3KQ87 197 aa12.51□□□□□ -0.41
CDT1-202ENST00000562747 RPS10-NUDT3A0A1W2PQS6 291 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 K7EMT4 169 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 TCRBP04435 133 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 HOXB5P09067 269 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 NPY1RP25929 384 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 ATP5IP56385 69 aaPredicted RBP12.5□□□□□ -0.41
CDT1-202ENST00000562747 C4orf46Q504U0 113 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 RCHY1Q96PM5 261 aa12.5□□□□□ -0.41
CDT1-202ENST00000562747 FNDC4Q9H6D8 234 aaPredicted RBP12.5□□□□□ -0.41
CDT1-202ENST00000562747 IZUMO1RA6ND01 250 aa12.49□□□□□ -0.41
CDT1-202ENST00000562747 C15orf62A8K5M9 175 aa12.49□□□□□ -0.41
CDT1-202ENST00000562747 GTSCR1Q86UQ5 136 aa12.49□□□□□ -0.41
CDT1-202ENST00000562747 OR4X1Q8NH49 305 aa12.49□□□□□ -0.41
CDT1-202ENST00000562747 ZNF414Q96IQ9 312 aa12.49□□□□□ -0.41
CDT1-202ENST00000562747 MLXQ9UH92 298 aa12.49□□□□□ -0.41
CDT1-202ENST00000562747 CLN5O75503 358 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 SCGB2A1O75556 95 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 MED6O75586 246 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 TMEM50AO95807 157 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 IFNA10P01566 189 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 SLC25A4P12235 298 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 ETFRF1Q6IPR1 90 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 MZT2BQ6NZ67 158 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 Q8N1Y9 231 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 TMEM170AQ8WVE7 144 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 OR10C1Q96KK4 312 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 C20orf24Q9BUV8 137 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 TBC1D24Q9ULP9 559 aa12.48□□□□□ -0.41
CDT1-202ENST00000562747 TRAV30A0A087WSZ9 112 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 TRAV25A0A0B4J276 109 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 ZNF785A8K8V0 405 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 UPK1BO75841 260 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 IFNA21P01568 189 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 ASAH1Q13510 395 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 MLANAQ16655 118 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 ZNF600Q6ZNG1 722 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 MITD1Q8WV92 249 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 NUDT15Q9NV35 164 aa12.47□□□□□ -0.41
CDT1-202ENST00000562747 MRPL36Q9P0J6 103 aaKnown RBP12.47□□□□□ -0.41
CDT1-202ENST00000562747 TRAV6A0A075B6T7 132 aa12.46□□□□□ -0.41
CDT1-202ENST00000562747 FAM240BA0A1B0GVZ2 78 aa12.46□□□□□ -0.41
CDT1-202ENST00000562747 ADAP1O75689 374 aa12.46□□□□□ -0.41
CDT1-202ENST00000562747 YIF1AO95070 293 aa12.46□□□□□ -0.41
CDT1-202ENST00000562747 TMEM61Q8N0U2 210 aa12.46□□□□□ -0.41
CDT1-202ENST00000562747 TMEM116Q8NCL8 245 aa12.46□□□□□ -0.41
CDT1-202ENST00000562747 CIB3Q96Q77 187 aaPredicted RBP12.46□□□□□ -0.41
CDT1-202ENST00000562747 IGHV3OR16-8A0A075B7F1 116 aa12.45□□□□□ -0.42
CDT1-202ENST00000562747 A8MZ25 164 aa12.45□□□□□ -0.42
CDT1-202ENST00000562747 SYNGR2O43760 224 aa12.45□□□□□ -0.42
CDT1-202ENST00000562747 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
CDT1-202ENST00000562747 PRSS54Q6PEW0 395 aa12.45□□□□□ -0.42
CDT1-202ENST00000562747 OR52B4Q8NGK2 314 aa12.45□□□□□ -0.42
CDT1-202ENST00000562747 WDR89Q96FK6 387 aaPredicted RBP12.45□□□□□ -0.42
CDT1-202ENST00000562747 GINS3Q9BRX5 216 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms