RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 RBMY1BA6NDE4 496 aaKnown RBP17.82■□□□□ 0.44
CDR2-202ENST00000561630 RBMY1EA6NEQ0 496 aaKnown RBP17.82■□□□□ 0.44
CDR2-202ENST00000561630 RBMY1DP0C7P1 496 aaKnown RBP17.82■□□□□ 0.44
CDR2-202ENST00000561630 SULT1A3P0DMM9 295 aa17.82■□□□□ 0.44
CDR2-202ENST00000561630 SULT1A4P0DMN0 295 aa17.82■□□□□ 0.44
CDR2-202ENST00000561630 ANXA3P12429 323 aa17.82■□□□□ 0.44
CDR2-202ENST00000561630 HTR2BP41595 481 aa17.82■□□□□ 0.44
CDR2-202ENST00000561630 SRPXP78539 464 aa17.82■□□□□ 0.44
CDR2-202ENST00000561630 LAMTOR1Q6IAA8 161 aa17.82■□□□□ 0.44
CDR2-202ENST00000561630 SRRQ9GZT4 340 aa17.82■□□□□ 0.44
CDR2-202ENST00000561630 FNDC4Q9H6D8 234 aaPredicted RBP17.82■□□□□ 0.44
CDR2-202ENST00000561630 HEYLQ9NQ87 328 aaPredicted RBP17.82■□□□□ 0.44
CDR2-202ENST00000561630 IGHV7-4-1A0A0J9YVY3 117 aa17.81■□□□□ 0.44
CDR2-202ENST00000561630 TMEM50AO95807 157 aa17.81■□□□□ 0.44
CDR2-202ENST00000561630 OPRK1P41145 380 aa17.81■□□□□ 0.44
CDR2-202ENST00000561630 NMSQ5H8A3 153 aa17.81■□□□□ 0.44
CDR2-202ENST00000561630 LYZL2Q7Z4W2 148 aa17.81■□□□□ 0.44
CDR2-202ENST00000561630 LGI3Q8N145 548 aa17.81■□□□□ 0.44
CDR2-202ENST00000561630 CITED4Q96RK1 184 aa17.81■□□□□ 0.44
CDR2-202ENST00000561630 SLC25A21Q9BQT8 299 aaPredicted RBP17.81■□□□□ 0.44
CDR2-202ENST00000561630 CEBPZOSA8MTT3 80 aa17.8■□□□□ 0.44
CDR2-202ENST00000561630 CCR6P51684 374 aa17.8■□□□□ 0.44
CDR2-202ENST00000561630 TMEM128Q5BJH2 165 aa17.8■□□□□ 0.44
CDR2-202ENST00000561630 TMED4Q7Z7H5 227 aa17.8■□□□□ 0.44
CDR2-202ENST00000561630 TMEM116Q8NCL8 245 aa17.8■□□□□ 0.44
CDR2-202ENST00000561630 RHPN1-AS1Q9BWJ2 59 aa17.8■□□□□ 0.44
CDR2-202ENST00000561630 TRAV14DV4A0A0A6YYC5 116 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 PIGBOS1A0A0B4J2F0 54 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 C3orf84H3BNL1 204 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 CHEK1O14757 476 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 MLANAQ16655 118 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 C2orf83Q53S99 150 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 TOMM20LQ6UXN7 152 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 ZNF600Q6ZNG1 722 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 OR4X1Q8NH49 305 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 HIPK2Q9H2X6 1198 aa17.79■□□□□ 0.44
CDR2-202ENST00000561630 MRPL36Q9P0J6 103 aaKnown RBP17.79■□□□□ 0.44
CDR2-202ENST00000561630 CLN5O75503 358 aa17.78■□□□□ 0.44
CDR2-202ENST00000561630 TNFRSF9Q07011 255 aa17.78■□□□□ 0.44
CDR2-202ENST00000561630 SMCO1Q147U7 214 aa17.78■□□□□ 0.44
CDR2-202ENST00000561630 SLC24A4Q8NFF2 622 aa17.78■□□□□ 0.44
CDR2-202ENST00000561630 MUC7Q8TAX7 377 aa17.78■□□□□ 0.44
CDR2-202ENST00000561630 RNF2Q99496 336 aa17.78■□□□□ 0.44
CDR2-202ENST00000561630 GINS3Q9BRX5 216 aa17.78■□□□□ 0.44
CDR2-202ENST00000561630 PUS1Q9Y606 427 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDR2-202ENST00000561630 NXPH3O95157 252 aa17.77■□□□□ 0.44
CDR2-202ENST00000561630 RNASEH2CQ8TDP1 164 aaKnown RBP17.77■□□□□ 0.44
CDR2-202ENST00000561630 ZFAND3Q9H8U3 227 aa17.77■□□□□ 0.44
CDR2-202ENST00000561630 HSPB7Q9UBY9 170 aa17.77■□□□□ 0.44
CDR2-202ENST00000561630 IGHV3-49A0A0A0MS15 119 aa17.76■□□□□ 0.43
CDR2-202ENST00000561630 RPS10-NUDT3A0A1W2PQS6 291 aa17.76■□□□□ 0.43
CDR2-202ENST00000561630 BAK1Q16611 211 aa17.76■□□□□ 0.43
CDR2-202ENST00000561630 TMEM170AQ8WVE7 144 aa17.76■□□□□ 0.43
CDR2-202ENST00000561630 EDA2RQ9HAV5 297 aa17.76■□□□□ 0.43
CDR2-202ENST00000561630 NDUFA13Q9P0J0 144 aa17.76■□□□□ 0.43
CDR2-202ENST00000561630 A0A1B0GU03 582 aa17.75■□□□□ 0.43
CDR2-202ENST00000561630 DUXBA0A1W2PPF3 345 aa17.75■□□□□ 0.43
CDR2-202ENST00000561630 OR4C46A6NHA9 309 aa17.75■□□□□ 0.43
CDR2-202ENST00000561630 VAMP1P23763 118 aa17.75■□□□□ 0.43
CDR2-202ENST00000561630 LRTM2Q8N967 370 aa17.75■□□□□ 0.43
CDR2-202ENST00000561630 SCGB2A1O75556 95 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 NPY1RP25929 384 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 TRIQKQ629K1 86 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 NOXA1Q86UR1 476 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 FAM110AQ9BQ89 295 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 GGTLC1Q9BX51 225 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 RETNQ9HD89 108 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 U3KQ87 197 aa17.74■□□□□ 0.43
CDR2-202ENST00000561630 IGHV3OR16-13A0A075B7E8 117 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 TRAV30A0A087WSZ9 112 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 IGHV3-74A0A0B4J1X5 117 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 IGKV1-17P01599 117 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 SLC25A4P12235 298 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 BMI1P35226 326 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 INPP1P49441 399 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 PPP1R1AQ13522 171 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 RBMS2Q15434 407 aaKnown RBP17.73■□□□□ 0.43
CDR2-202ENST00000561630 ODF3L2Q3SX64 289 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 FAM90A2PQ658T7 463 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 PRSS54Q6PEW0 395 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 CENPSQ8N2Z9 138 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 DTD1Q8TEA8 209 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 SDHCQ99643 169 aaPredicted RBP17.73■□□□□ 0.43
CDR2-202ENST00000561630 RBKSQ9H477 322 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 VSIRQ9H7M9 311 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 UBQLN2Q9UHD9 624 aa17.73■□□□□ 0.43
CDR2-202ENST00000561630 LOC102724200A0A096LPH7 203 aaPredicted RBP17.72■□□□□ 0.43
CDR2-202ENST00000561630 NAP1L6A6NFF2 107 aa17.72■□□□□ 0.43
CDR2-202ENST00000561630 SFT2D2O95562 160 aa17.72■□□□□ 0.43
CDR2-202ENST00000561630 CD5P06127 495 aa17.72■□□□□ 0.43
CDR2-202ENST00000561630 OR1S1Q8NH92 325 aa17.72■□□□□ 0.43
CDR2-202ENST00000561630 ST8SIA2Q92186 375 aa17.72■□□□□ 0.43
CDR2-202ENST00000561630 PITX3O75364 302 aa17.71■□□□□ 0.43
CDR2-202ENST00000561630 IFNA10P01566 189 aa17.71■□□□□ 0.43
CDR2-202ENST00000561630 APOHP02749 345 aaPredicted RBP17.71■□□□□ 0.43
CDR2-202ENST00000561630 RND2P52198 227 aa17.71■□□□□ 0.43
CDR2-202ENST00000561630 TIGITQ495A1 244 aa17.71■□□□□ 0.43
CDR2-202ENST00000561630 ETFRF1Q6IPR1 90 aa17.71■□□□□ 0.43
CDR2-202ENST00000561630 RYR3Q15413 4870 aa17.71■□□□□ 0.43
CDR2-202ENST00000561630 IGLC1P0CG04 106 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms