RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 FAM89BQ8N5H3 189 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 DDB2Q92466 427 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 COQ2Q96H96 371 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 CLEC7AQ9BXN2 247 aa8.54□□□□□ -1.04
GTF3C1-202ENST00000561623 TRAV12-3A0A0B4J271 114 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 OR9G9P0C7N8 305 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 FOXL1Q12952 345 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 EFNB3Q15768 340 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 VKORC1Q9BQB6 163 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 UNC13CQ8NB66 2214 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 STAG3L3P0CL85 134 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 PRB3Q04118 309 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 SPATA31B1PQ5VZV4 182 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 A0A1W2PRE2 83 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 CELA3BP08861 270 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 FBLN5Q9UBX5 448 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 TAF1LQ8IZX4 1826 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 TRAV5A0A0B4J249 113 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 GTF3AQ92664 365 aaKnown RBP8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 A0A087X0K7 114 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 TDGF1P3P51864 188 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 ATP5IP56385 69 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 C5orf24Q7Z6I8 188 aa8.53□□□□□ -1.04
GTF3C1-202ENST00000561623 PSG1P11464 419 aa8.52□□□□□ -1.04
GTF3C1-202ENST00000561623 CDKN1AP38936 164 aa8.52□□□□□ -1.04
GTF3C1-202ENST00000561623 FAM71F2Q6NXP2 309 aa8.52□□□□□ -1.04
GTF3C1-202ENST00000561623 CIARTQ8N365 385 aaPredicted RBP8.52□□□□□ -1.04
GTF3C1-202ENST00000561623 SP7Q8TDD2 431 aaPredicted RBP8.52□□□□□ -1.04
GTF3C1-202ENST00000561623 ARID2Q68CP9 1835 aa8.52□□□□□ -1.04
GTF3C1-202ENST00000561623 THSD7AQ9UPZ6 1657 aa8.52□□□□□ -1.04
GTF3C1-202ENST00000561623 HBDP02042 147 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 SAA1P0DJI8 122 aaPredicted RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 GTSCR1Q86UQ5 136 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 OSR1Q8TAX0 266 aaPredicted RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 EPDR1Q9UM22 224 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 FOXH1O75593 365 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 PPIFP30405 207 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 ASIPP42127 132 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 FXYD7P58549 80 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 RNASEH2CQ8TDP1 164 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 SAA2-SAA4A0A096LPE2 208 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 IFNL4K9M1U5 179 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 NPFFO15130 113 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 HOXA3O43365 443 aaPredicted RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 SAA2P0DJI9 122 aaPredicted RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 TMEM144Q7Z5S9 345 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 LURAP1LQ8IV03 231 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 ZNF479Q96JC4 524 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 MPV17L2Q567V2 206 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 RNF144BQ7Z419 303 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 SHISA5Q8N114 240 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 FDCSPQ8NFU4 85 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 ST20Q9HBF5 79 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 A0A1B0GW15 77 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 A0A1B0GW64 132 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 C9JQL5 133 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 CSRP1P21291 193 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 LHFPL1Q86WI0 220 aa8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 FAM110DQ8TAY7 271 aaPredicted RBP8.52□□□□□ -1.05
GTF3C1-202ENST00000561623 TCRBV4S1A1TA0A5B7 111 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 AHRRA9YTQ3 701 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 DNM1P46Q6ZS02 220 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 LINC01551Q86U37 167 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 SIGLEC12Q96PQ1 595 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 DNASE2BQ8WZ79 361 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 EEF1AKMT3Q96AZ1 226 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 KBTBD11-OT1A0A1B0GTJ5 212 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 DPM2O94777 84 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 CCL1P22362 96 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 PSG7Q13046 419 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 ZNF703Q9H7S9 590 aaPredicted RBP8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 CEACAM4O75871 244 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 WBP1Q96G27 269 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 OTORQ9NRC9 128 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 MYOFQ9NZM1 2061 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKV3D-20A0A0C4DH25 116 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKV1-12A0A0C4DH73 117 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 A0A0G2JLM5 398 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKV1D-12P01611 117 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 C3orf79P0CE67 100 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 HSD52Q0P140 79 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 GAGE13Q4V321 117 aa8.51□□□□□ -1.05
GTF3C1-202ENST00000561623 CECR9P0C854 216 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 RNASE4P34096 147 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 SEC11AP67812 179 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 UBE2V1Q13404 147 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 Q6AWC8 147 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 MCRIP2Q9BUT9 160 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 RBBP6Q7Z6E9 1792 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 SRSF7Q16629 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 ZNF497Q6ZNH5 498 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 NYNRINQ9P2P1 1898 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKCP01834 107 aa8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 RPP25LQ8N5L8 163 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-202ENST00000561623 TRAV21A0A0B4J279 112 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms