RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 IFNA10P01566 189 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 ANKRD55Q3KP44 614 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 LAMTOR1Q6IAA8 161 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 DEFB125Q8N687 156 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 SLC24A4Q8NFF2 622 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 WWC2-AS2Q96NR7 200 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 IGHV3-49A0A0A0MS15 119 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 C8orf88P0DMB2 117 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 FCGR2BP31994 310 aaPredicted RBP9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 TNFRSF9Q07011 255 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 PPP1R1AQ13522 171 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 MLANAQ16655 118 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 AARDQ4LEZ3 155 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 NMSQ5H8A3 153 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 DTD1Q8TEA8 209 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 RCHY1Q96PM5 261 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 GINS3Q9BRX5 216 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 WFDC10AQ9H1F0 79 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 SRD5A3Q9H8P0 318 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 C19orf73Q9NVV2 129 aa9.76□□□□□ -0.85
CTDSPL2-209ENST00000560620 TRAV14DV4A0A0A6YYC5 116 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 TRAV25A0A0B4J276 109 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 A0A1B0GU03 582 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 DUXBA0A1W2PPF3 345 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 A8MZ25 164 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 K7EMT4 169 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 SFT2D2O95562 160 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 TMEM50AO95807 157 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 IL7P13232 177 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 NPY1RP25929 384 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 ZNF600Q6ZNG1 722 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 NOXA1Q86UR1 476 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 TMEM116Q8NCL8 245 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 RBKSQ9H477 322 aa9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 FNDC4Q9H6D8 234 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 PUS1Q9Y606 427 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTDSPL2-209ENST00000560620 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 IGHV3OR16-13A0A075B7E8 117 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 IGHV3-74A0A0B4J1X5 117 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 IGHV7-4-1A0A0J9YVY3 117 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 CLN5O75503 358 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 NDUFB6O95139 128 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 IFNA4P05014 189 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 HOXB5P09067 269 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 BMI1P35226 326 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 C2orf83Q53S99 150 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 ETFRF1Q6IPR1 90 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 TOMM20LQ6UXN7 152 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 SPAG8Q99932 426 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 RHPN1-AS1Q9BWJ2 59 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 HSPB7Q9UBY9 170 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 SMPXQ9UHP9 88 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 PAIP2BQ9ULR5 123 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
CTDSPL2-209ENST00000560620 SLC25A4P12235 298 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 RND2P52198 227 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 RPL11P62913 178 aaKnown RBP9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 HAGHQ16775 308 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 C4orf46Q504U0 113 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 PVRIGQ6DKI7 326 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 OR4X1Q8NH49 305 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 RNF2Q99496 336 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 SDHCQ99643 169 aaPredicted RBP9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 C7orf50Q9BRJ6 194 aaKnown RBP9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 UBQLN2Q9UHD9 624 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 FLVCR2Q9UPI3 526 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 TMED3Q9Y3Q3 217 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 U3KQ87 197 aa9.73□□□□□ -0.85
CTDSPL2-209ENST00000560620 TRAV30A0A087WSZ9 112 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 IGHV3-66A0A0C4DH42 116 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 C9orf170A2RU37 121 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 OR4C46A6NHA9 309 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 CHEK1O14757 476 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 TSPAN4O14817 238 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 TFPI2P48307 235 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 UBE2MP61081 183 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 COQ8AQ8NI60 647 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 ACY3Q96HD9 319 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 NARS2Q96I59 477 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 SPATA25Q9BR10 227 aa9.72□□□□□ -0.85
CTDSPL2-209ENST00000560620 MED6O75586 246 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 IFNA21P01568 189 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 OR4E1P0C645 316 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 IAPPP10997 89 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 ANXA7P20073 488 aaKnown RBP9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 NPPCP23582 126 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 OR10J1P30954 320 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 PAFAH1B2P68402 229 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 TIGITQ495A1 244 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 GGNBP1Q5YKI7 109 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 PRSS54Q6PEW0 395 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 GBGT1Q8N5D6 347 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 Q8WTZ3 238 aa9.71□□□□□ -0.86
CTDSPL2-209ENST00000560620 METTL26Q96S19 204 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms