RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 KIFC1Q9BW19 673 aa1.11□□□□□ -2.23
USP8-211ENST00000560527 ENY2Q9NPA8 101 aa1.11□□□□□ -2.23
USP8-211ENST00000560527 MED9Q9NWA0 146 aa1.11□□□□□ -2.23
USP8-211ENST00000560527 IL20Q9NYY1 176 aa1.11□□□□□ -2.23
USP8-211ENST00000560527 OPTCQ9UBM4 332 aa1.11□□□□□ -2.23
USP8-211ENST00000560527 BICRAQ9NZM4 1560 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 NCOA1Q15788 1441 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 TRAV9-1A0A075B6T8 112 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 hCG_1818297A0A087WSY0 165 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 A8MT66 165 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 FABP5P3A8MUU1 101 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 BUB1B-PAK6H3BSN5 160 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 PIRO00625 290 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 RPSAP08865 295 aaKnown RBP1.1□□□□□ -2.23
USP8-211ENST00000560527 SMIM17P0DL12 118 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 SULT1A3P0DMM9 295 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 SULT1A4P0DMN0 295 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 SMIM10L2AP0DMW4 78 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 SMIM10L2BP0DMW5 78 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 EIF2B2P49770 351 aaKnown RBP1.1□□□□□ -2.23
USP8-211ENST00000560527 FXYD2P54710 66 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 SUPT4H1P63272 117 aaKnown RBP1.1□□□□□ -2.23
USP8-211ENST00000560527 NDUFA5Q16718 116 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 ARHGAP11BQ3KRB8 267 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 FAM27BQ5VT28 67 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 DHRS4L2Q6PKH6 230 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 FP248Q71RG6 208 aaPredicted RBP1.1□□□□□ -2.23
USP8-211ENST00000560527 OOSP2Q86WS3 158 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 BPIFA4PQ86YQ2 179 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 C12orf45Q8N5I9 185 aaPredicted RBP1.1□□□□□ -2.23
USP8-211ENST00000560527 OR52R1Q8NGF1 315 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 TOMM6Q96B49 74 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 BTF3L4Q96K17 158 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 NMNAT1Q9HAN9 279 aaPredicted RBP1.1□□□□□ -2.23
USP8-211ENST00000560527 ARL5AQ9Y689 179 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 ZFHX4Q86UP3 3567 aa1.1□□□□□ -2.23
USP8-211ENST00000560527 COL6A3P12111 3177 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 STRCQ7RTU9 1775 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 LRP5O75197 1615 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 RP1P56715 2156 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 IRGMA1A4Y4 181 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 CLDN25C9JDP6 229 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 TMEM238C9JI98 176 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 SLC22A1O15245 554 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 ORC5O43913 435 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 OR2J2O76002 312 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 OR5F1O95221 314 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 CRPP02741 224 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 SERPINE1P05121 402 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 TRGC1P0CF51 173 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 LYNX1P0DP58 116 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 RPS4Y1P22090 263 aaKnown RBP1.09□□□□□ -2.23
USP8-211ENST00000560527 GNG10P50151 68 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 ZNF80P51504 273 aaPredicted RBP1.09□□□□□ -2.23
USP8-211ENST00000560527 IBA57Q5T440 356 aaKnown RBP1.09□□□□□ -2.23
USP8-211ENST00000560527 TEX36Q5VZQ5 186 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 RPL22L1Q6P5R6 122 aaKnown RBP1.09□□□□□ -2.23
USP8-211ENST00000560527 CLVS1Q8IUQ0 354 aaPredicted RBP1.09□□□□□ -2.23
USP8-211ENST00000560527 KRT222Q8N1A0 295 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 C9orf163Q8N9P6 203 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 OR13C4Q8NGS5 318 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 MCFD2Q8NI22 146 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 SLC25A40Q8TBP6 338 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 C10orf105Q8TEF2 133 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 RASSF5Q8WWW0 418 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 AP3S1Q92572 193 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 CCDC90BQ9GZT6 254 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 ARMC1Q9NVT9 282 aa1.09□□□□□ -2.23
USP8-211ENST00000560527 SOX21Q9Y651 276 aaPredicted RBP1.09□□□□□ -2.23
USP8-211ENST00000560527 DIDO1Q9BTC0 2240 aaKnown RBP1.09□□□□□ -2.24
USP8-211ENST00000560527 TTC21AQ8NDW8 1320 aa1.09□□□□□ -2.24
USP8-211ENST00000560527 HMGXB3Q12766 1538 aa1.09□□□□□ -2.24
USP8-211ENST00000560527 KIF24Q5T7B8 1368 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 ARFGEF3Q5TH69 2177 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 IGKV2-40A0A087WW87 121 aaPredicted RBP1.08□□□□□ -2.24
USP8-211ENST00000560527 IGKV3D-7A0A0C4DH55 119 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 IGKV3OR2-268A0A0C4DH90 116 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 IBA57-AS1B1ANH7 110 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 SULT1B1O43704 296 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 IGKV2D-40P01614 121 aaPredicted RBP1.08□□□□□ -2.24
USP8-211ENST00000560527 C8GP07360 202 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 RBP1P09455 135 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 METTL15P1P0C7V9 234 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 CDC42P60953 191 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 LYG2Q86SG7 212 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 DHFR2Q86XF0 187 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 OR8B3Q8NGG8 313 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 DNAJC9Q8WXX5 260 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 ANP32BQ92688 251 aaKnown RBP1.08□□□□□ -2.24
USP8-211ENST00000560527 HOPXQ9BPY8 73 aaPredicted RBP1.08□□□□□ -2.24
USP8-211ENST00000560527 C20orf27Q9GZN8 174 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 STOML2Q9UJZ1 356 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 LHFPL6Q9Y693 200 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 MAST4O15021 2626 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 A0A0C4DFX4 3053 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 GLI3P10071 1580 aa1.08□□□□□ -2.24
USP8-211ENST00000560527 NEO1Q92859 1461 aa1.07□□□□□ -2.24
USP8-211ENST00000560527 SDCBPO00560 298 aaPredicted RBP1.07□□□□□ -2.24
USP8-211ENST00000560527 HMGB3O15347 200 aaKnown RBP1.07□□□□□ -2.24
USP8-211ENST00000560527 OR2B3O76000 313 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms