RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 OR5T1Q8NG75 326 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 SLC35E1Q96K37 410 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 OR4C12Q96R67 309 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 ATP5SQ99766 215 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 FAM103A1Q9BTL3 118 aaKnown RBP9.23□□□□□ -0.93
LDLR-212ENST00000560467 WNT10AQ9GZT5 417 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 UQCC1Q9NVA1 299 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 F11RQ9Y624 299 aaKnown RBP9.23□□□□□ -0.93
LDLR-212ENST00000560467 RNF222A6NCQ9 220 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 TEX22C9J3V5 150 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 ATP6V0E1O15342 81 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 IGF1P05019 195 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 CRYGCP07315 174 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 RNASE2P10153 161 aaKnown RBP9.22□□□□□ -0.93
LDLR-212ENST00000560467 BLCAPP62952 87 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 DLK1P80370 383 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 MRGPRG-AS1Q2M3A8 158 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 Q6ZS46 218 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 P2RX4Q99571 388 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 HSPB9Q9BQS6 159 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 TMEM147Q9BVK8 224 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 C11orf1Q9H5F2 150 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 KCNIP2Q9NS61 270 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 FBXL17Q9UF56 701 aa9.22□□□□□ -0.93
LDLR-212ENST00000560467 DNAH9Q9NYC9 4486 aa9.21□□□□□ -0.93
LDLR-212ENST00000560467 C15orf62A8K5M9 175 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 E7EUB6 86 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 C17orf112F2Z3M2 114 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 MPDU1O75352 247 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 AMY1AP04745 511 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 FABP1P07148 127 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 CTRB1P17538 263 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 CD33P20138 364 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 AKR1C1Q04828 323 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 CTRB2Q6GPI1 263 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 STPG2Q8N412 459 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 GNPNAT1Q96EK6 184 aaPredicted RBP9.21□□□□□ -0.94
LDLR-212ENST00000560467 NPVFQ9HCQ7 196 aa9.21□□□□□ -0.94
LDLR-212ENST00000560467 GAR1Q9NY12 217 aaKnown RBP9.21□□□□□ -0.94
LDLR-212ENST00000560467 SH2D7A6NKC9 451 aaPredicted RBP9.2□□□□□ -0.94
LDLR-212ENST00000560467 FNDC10F2Z333 226 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 H3BUA1 57 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 IFNA7P01567 189 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 NPBWR1P48145 328 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 BSXQ3C1V8 233 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 CENPVQ7Z7K6 275 aaPredicted RBP9.2□□□□□ -0.94
LDLR-212ENST00000560467 BAP18Q8IXM2 172 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 UBAC2Q8NBM4 344 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 NECAP1Q8NC96 275 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 CXorf58Q96LI9 332 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 SLA2Q9H6Q3 261 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 ZNF580Q9UK33 172 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 FBXO7Q9Y3I1 522 aa9.2□□□□□ -0.94
LDLR-212ENST00000560467 A0A0G2JLM5 398 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 WI2-2373I1.2A0A1W2PRP0 233 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 CGB1A6NKQ9 187 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 SOX15O60248 233 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 CRIP2P52943 208 aaPredicted RBP9.19□□□□□ -0.94
LDLR-212ENST00000560467 KRTAP10-11P60412 298 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 SSBP2P81877 361 aaPredicted RBP9.19□□□□□ -0.94
LDLR-212ENST00000560467 ATP5G2Q06055 141 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 CD69Q07108 199 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 LAMTOR1Q6IAA8 161 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 ACSM6Q6P461 480 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 SLC16A13Q7RTY0 426 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 WFDC9Q8NEX5 89 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 FBXL7Q9UJT9 491 aa9.19□□□□□ -0.94
LDLR-212ENST00000560467 TRAV30A0A087WSZ9 112 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 UBE2L5PA0A1B0GUS4 154 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 A0A1B0GW64 132 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 FAM223BA6NKX1 122 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 G3V318 75 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 MT-CO2P00403 227 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 TRGV3P03979 118 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 PF4V1P10720 104 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 EGR2P11161 476 aaPredicted RBP9.18□□□□□ -0.94
LDLR-212ENST00000560467 FGF7P21781 194 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 MFAP4P55083 255 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 RAB14P61106 215 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 NDPQ00604 133 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 TCTEX1D4Q5JR98 221 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 FAM209BQ5JX69 171 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 RPL7L1Q6DKI1 246 aaKnown RBP9.18□□□□□ -0.94
LDLR-212ENST00000560467 TEX38Q6PEX7 206 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 FAM223AQ8IWN6 122 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 COMMD1Q8N668 190 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 VN1R17PQ8TDU5 208 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 PHYHIPLQ96FC7 376 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 ACY3Q96HD9 319 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 USMG5Q96IX5 58 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 BOLA1Q9Y3E2 137 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
LDLR-212ENST00000560467 PSMB11A5LHX3 300 aa9.17□□□□□ -0.94
LDLR-212ENST00000560467 ZFP92A6NM28 416 aa9.17□□□□□ -0.94
LDLR-212ENST00000560467 LINC01548A6NM66 108 aa9.17□□□□□ -0.94
LDLR-212ENST00000560467 OR2J3O76001 311 aa9.17□□□□□ -0.94
LDLR-212ENST00000560467 BRI3O95415 125 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms