RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ICAM4Q14773 271 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 PEA15Q15121 130 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 OR5T1Q8NG75 326 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 SLC35E1Q96K37 410 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 Q96MF0 132 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 PBDC1Q9BVG4 233 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 ACTR3CQ9C0K3 210 aaPredicted RBP8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 LINC00527Q9UJ94 153 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 F11RQ9Y624 299 aaKnown RBP8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 CR1P17927 2039 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 PDZD2O15018 2839 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 AKAP9Q99996 3911 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 CYB5BO43169 146 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 MPDU1O75352 247 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 SCAF4O95104 1147 aaKnown RBP8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 LINC00869P0C866 280 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 PAX1P15863 534 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 SLC25A16P16260 332 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 BRS3P32247 399 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 MAS1LP35410 378 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 UBE2G2P60604 165 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 ASPHD1Q5U4P2 390 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 OOSP1A8MZH6 123 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 IGHV3-23P01764 117 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 HBE1P02100 147 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 MBP02144 154 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 NPBWR1P48145 328 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 DSCR9P59020 149 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 EBI3Q14213 229 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 FAM78BQ5VT40 261 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 BCL6BQ8N143 479 aaPredicted RBP8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 CYB561D1Q8N8Q1 229 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 ARPC1AQ92747 370 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 UHRF2Q96PU4 802 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 SSX3Q99909 188 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 TNFRSF19Q9NS68 423 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 SLC45A2Q9UMX9 530 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 SONP18583 2426 aaKnown RBP8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 IGKV1D-37A0A075B6S9 117 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 CTRB1P17538 263 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 PRR20EP86478 221 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 PRR20CP86479 221 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 PRR20DP86480 221 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 PRR20BP86481 221 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 PRR20AP86496 221 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 RAB31Q13636 194 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 MORN5Q5VZ52 161 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 CTRB2Q6GPI1 263 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 TMEM88Q6PEY1 159 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 MIR17HGQ75NE6 70 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 COMMD1Q8N668 190 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 OR1P1Q8NH06 330 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 PIFOQ8TCI5 191 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 RNASEH2CQ8TDP1 164 aaKnown RBP8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 SEC11CQ9BY50 192 aa8.6□□□□□ -1.03
SNRPA1-211ENST00000560433 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 RPL29P47914 159 aaKnown RBP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 ECSCRQ19T08 205 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 LINC01356Q8N9X3 169 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 TMEM37Q8WXS4 190 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 CACNG8Q8WXS5 425 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 RASL11BQ9BPW5 248 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 FLNAP21333 2647 aaKnown RBP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 UNC79Q9P2D8 2635 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 ACANP16112 2415 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 TRAV1-1A0A0B4J248 108 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 G3V318 75 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 HSPB1P04792 205 aaKnown RBP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 SRP19P09132 144 aaKnown RBP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 EGR2P11161 476 aaPredicted RBP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 GPX4P36969 197 aaPredicted RBP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 CIARTQ8N365 385 aaPredicted RBP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 WFDC11Q8NEX6 87 aa8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 PUS1Q9Y606 427 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNRPA1-211ENST00000560433 TRAV5A0A0B4J249 113 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 LOC102723971A0A1B0GUV8 181 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 BTBD17A6NE02 478 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 FAM74A7A6NL05 159 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 H3BUX3 64 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 PAGE4O60829 102 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 BCL2P10415 239 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 FAM74A3Q4VXF1 159 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 C9orf152Q5JTZ5 239 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 C10orf91Q5T1B1 145 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 TMUB1Q9BVT8 246 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 NKX6-2Q9C056 277 aaPredicted RBP8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 ATP6V0E1O15342 81 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 ORM2P19652 201 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 ATP5IP56385 69 aaPredicted RBP8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 ZNF506Q5JVG8 444 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 KRTAP1-3Q8IUG1 177 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 ZNF114Q8NC26 417 aa8.58□□□□□ -1.04
SNRPA1-211ENST00000560433 I3L2K1 104 aa8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 OR10J4P0C629 311 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms