RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 GNG7O60262 68 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 PTTG1O95997 202 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 NKX2-1P43699 371 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-208ENST00000560427 ELLP55199 621 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-208ENST00000560427 DEFA6Q01524 100 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 ID3Q02535 119 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 IAH1Q2TAA2 248 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-208ENST00000560427 UBAC2Q8NBM4 344 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 OR4X1Q8NH49 305 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 MARC2Q969Z3 335 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
NEDD8-208ENST00000560427 MPTX1A8MV57 137 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 WRBO00258 174 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 CSN3P07498 182 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 CTSGP08311 255 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 ADMP35318 185 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 RAB11AP62491 216 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 DCTN2Q13561 401 aaKnown RBP9.91□□□□□ -0.82
NEDD8-208ENST00000560427 IL34Q6ZMJ4 242 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 ZBTB8BQ8NAP8 495 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-208ENST00000560427 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 OR2K2Q8NGT1 345 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 TMEM170AQ8WVE7 144 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 TMEM190Q8WZ59 177 aa9.91□□□□□ -0.82
NEDD8-208ENST00000560427 FNDC4Q9H6D8 234 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-208ENST00000560427 MEGF8Q7Z7M0 2845 aa9.9□□□□□ -0.82
NEDD8-208ENST00000560427 TRAV30A0A087WSZ9 112 aa9.9□□□□□ -0.82
NEDD8-208ENST00000560427 CLN5O75503 358 aa9.9□□□□□ -0.82
NEDD8-208ENST00000560427 OR10C1Q96KK4 312 aa9.9□□□□□ -0.82
NEDD8-208ENST00000560427 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.82
NEDD8-208ENST00000560427 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.82
NEDD8-208ENST00000560427 AURKAIP1Q9NWT8 199 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-208ENST00000560427 ZNF320A2RRD8 509 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 C2orf70A6NJV1 201 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 K7EMT4 169 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 IFNA4P05014 189 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 IAPPP10997 89 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 GPX4P36969 197 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-208ENST00000560427 TAS2R30P59541 319 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 CD69Q07108 199 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 SLC16A13Q7RTY0 426 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 UXS1Q8NBZ7 420 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 CACNG8Q8WXS5 425 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 RAB40CQ96S21 281 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 MAGT1Q9H0U3 335 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 ZC4H2Q9NQZ6 224 aa9.89□□□□□ -0.83
NEDD8-208ENST00000560427 TECRQ9NZ01 308 aaKnown RBP9.89□□□□□ -0.83
NEDD8-208ENST00000560427 ZNF256Q9Y2P7 627 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-208ENST00000560427 C5orf51A6NDU8 294 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 C15orf62A8K5M9 175 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 TMEM50AO95807 157 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 IGHV3-48P01763 117 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 POLR2GP62487 172 aaKnown RBP eCLIP9.88□□□□□ -0.83
NEDD8-208ENST00000560427 LCN12Q6JVE5 192 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 C11orf87Q6NUJ2 197 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 PRSS54Q6PEW0 395 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 UNQ9165/PRO28630Q6UXU0 137 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 GSG1LQ6UXU4 331 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 ZNF600Q6ZNG1 722 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 OR1S2Q8NGQ3 325 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 DYNLRB2Q8TF09 96 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 SMIM8Q96KF7 97 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 C2orf50Q96LR7 162 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 MRPL27Q9P0M9 148 aaKnown RBP9.88□□□□□ -0.83
NEDD8-208ENST00000560427 GSKIPQ9P0R6 139 aa9.88□□□□□ -0.83
NEDD8-208ENST00000560427 STRAPQ9Y3F4 350 aaKnown RBP9.88□□□□□ -0.83
NEDD8-208ENST00000560427 FAM25EA8MYX2 175 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 CCSO14618 274 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 SSSCA1O60232 199 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 TSC22D2O75157 780 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 SCAF4O95104 1147 aaKnown RBP9.87□□□□□ -0.83
NEDD8-208ENST00000560427 SCGB1D2O95969 90 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 C8orf88P0DMB2 117 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 FOLR2P14207 255 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 CBLN1P23435 193 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 RND2P52198 227 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 SLC35E1Q96K37 410 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 GINS3Q9BRX5 216 aa9.87□□□□□ -0.83
NEDD8-208ENST00000560427 RCL1Q9Y2P8 373 aaKnown RBP9.87□□□□□ -0.83
NEDD8-208ENST00000560427 IGHV3-35A0A0C4DH35 117 aa9.86□□□□□ -0.83
NEDD8-208ENST00000560427 C7orf66A4D0T2 115 aa9.86□□□□□ -0.83
NEDD8-208ENST00000560427 MBPP02686 304 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-208ENST00000560427 IGLC1P0CG04 106 aa9.86□□□□□ -0.83
NEDD8-208ENST00000560427 SPNP16150 400 aa9.86□□□□□ -0.83
NEDD8-208ENST00000560427 YPEL3P61236 119 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-208ENST00000560427 SPANXN5Q5MJ07 72 aa9.86□□□□□ -0.83
NEDD8-208ENST00000560427 ADAMTSL5Q6ZMM2 481 aa9.86□□□□□ -0.83
NEDD8-208ENST00000560427 PSENENQ9NZ42 101 aa9.86□□□□□ -0.83
NEDD8-208ENST00000560427 MRPL36Q9P0J6 103 aaKnown RBP9.86□□□□□ -0.83
NEDD8-208ENST00000560427 PRSS46E5RG02 174 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 YIF1AO95070 293 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 IGKV1-17P01599 117 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 GP9P14770 177 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 PVALBP20472 110 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-208ENST00000560427 OR10J1P30954 320 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 BMI1P35226 326 aa9.85□□□□□ -0.83
NEDD8-208ENST00000560427 CYCSP99999 105 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms