RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 MARC2Q969Z3 335 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 OR4C12Q96R67 309 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 PSENENQ9NZ42 101 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 MPTX1A8MV57 137 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 FNDC10F2Z333 226 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 BMPR1BO00238 502 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 NDUFA4O00483 81 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 CLN5O75503 358 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 SCGB1D2O95969 90 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 GPR183P32249 361 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 POLR2GP62487 172 aaKnown RBP eCLIP9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 CD69Q07108 199 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 OR9G4Q8NGQ1 327 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 GGACTQ9BVM4 153 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 MAGT1Q9H0U3 335 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 MED28Q9H204 178 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 UFC1Q9Y3C8 167 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 PKD1L1Q8TDX9 2849 aa9.26□□□□□ -0.93
RABGGTA-215ENST00000560207 MGAM2Q2M2H8 2515 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 A8MWP6 167 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 SEC14L6B5MCN3 397 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 GOSR2O14653 212 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 SSSCA1O60232 199 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 NXPH3O95157 252 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 CFDP00746 253 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 MBPP02686 304 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 CTSGP08311 255 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 BMI1P35226 326 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 IL15RAQ13261 267 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 SPANXN5Q5MJ07 72 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 C19orf35Q6ZS72 473 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 UBAC2Q8NBM4 344 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 OR1S2Q8NGQ3 325 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 DLX4Q92988 240 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 SLC35E1Q96K37 410 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 ZNF436Q9C0F3 470 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 VWFP04275 2813 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 DNHD1Q96M86 4753 aa9.25□□□□□ -0.93
RABGGTA-215ENST00000560207 OR2T8A6NH00 312 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 C15orf62A8K5M9 175 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 E5RGE8 158 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 K7EMT4 169 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 CCSO14618 274 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 TMEM50AO95807 157 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 CD5P06127 495 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 IAPPP10997 89 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 SPNP16150 400 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 S100A7P31151 101 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 SLURP1P55000 103 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 YPEL3P61236 119 aaPredicted RBP9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 FGL1Q08830 312 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 HIST2H2BDQ6DRA6 164 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 PRSS54Q6PEW0 395 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 ZNF600Q6ZNG1 722 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 SLC16A13Q7RTY0 426 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 OR10P1Q8NGE3 313 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 OR2K2Q8NGT1 345 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 TECRQ9NZ01 308 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 PFDN2Q9UHV9 154 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 ALG5Q9Y673 324 aa9.24□□□□□ -0.93
RABGGTA-215ENST00000560207 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 PPP5D1E7EU14 171 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 K7EPK0 472 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 OR2C1O95371 312 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 TRBV12-3P01733 135 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 SYNJ2BPP57105 145 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 HBG1P69891 147 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 HBG2P69892 147 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 DEFA5Q01523 94 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 SAMD5Q5TGI4 173 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 TMEM14EPQ6UXP3 125 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 STX12Q86Y82 276 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 Q8WTZ3 238 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 SLC25A31Q9H0C2 315 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 FNDC4Q9H6D8 234 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 DAZ1Q9NQZ3 744 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 MRPL27Q9P0M9 148 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 MGAT4CQ9UBM8 478 aa9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 PAIP2BQ9ULR5 123 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 RCL1Q9Y2P8 373 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-215ENST00000560207 ZNF320A2RRD8 509 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 F8W735 103 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 DEDDO75618 318 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 IGHV3-23P01764 117 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 NUP62P37198 522 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 S100A10P60903 97 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 DLK1P80370 383 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 RAB32Q13637 225 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 ATP6V1FQ16864 119 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 KPRPQ5T749 579 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 S100A7AQ86SG5 101 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 TMEM170AQ8WVE7 144 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 TMEM190Q8WZ59 177 aa9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 NARS2Q96I59 477 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 LYRM2Q9NU23 88 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 LSM5Q9Y4Y9 91 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-215ENST00000560207 SORL1Q92673 2214 aa9.21□□□□□ -0.93
RABGGTA-215ENST00000560207 IGHV3-21A0A0B4J1V1 117 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms