RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 FAM103A1Q9BTL3 118 aaKnown RBP11.42□□□□□ -0.58
ZEB1-218ENST00000560196 C19orf24Q9BVV8 132 aa11.42□□□□□ -0.58
ZEB1-218ENST00000560196 MAP1LC3BQ9GZQ8 125 aa11.42□□□□□ -0.58
ZEB1-218ENST00000560196 TENM4Q6N022 2769 aa11.42□□□□□ -0.58
ZEB1-218ENST00000560196 IGLV11-55A0A075B6I3 123 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 IGKV1D-37A0A075B6S9 117 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 TCRBV4S1A1TA0A5B7 111 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 TMEM218A2RU14 115 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 H3BUX3 64 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 APELAP0DMC3 54 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 DEFA4P12838 97 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 CDC34P49427 236 aaPredicted RBP11.41□□□□□ -0.58
ZEB1-218ENST00000560196 RND2P52198 227 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 SRSF3P84103 164 aaKnown RBP11.41□□□□□ -0.58
ZEB1-218ENST00000560196 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 C19orf35Q6ZS72 473 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 SSX7Q7RTT5 188 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 OR4X1Q8NH49 305 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 FAM110DQ8TAY7 271 aaPredicted RBP11.41□□□□□ -0.58
ZEB1-218ENST00000560196 RAB24Q969Q5 203 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 FANCD2OSQ96PS1 177 aa11.41□□□□□ -0.58
ZEB1-218ENST00000560196 MRPL36Q9P0J6 103 aaKnown RBP11.41□□□□□ -0.58
ZEB1-218ENST00000560196 HELZ2Q9BYK8 2649 aaKnown RBP11.4□□□□□ -0.58
ZEB1-218ENST00000560196 NAV3Q8IVL0 2385 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 K7EIM0 57 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 NDUFS6O75380 124 aaKnown RBP11.4□□□□□ -0.58
ZEB1-218ENST00000560196 AMY1AP04745 511 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 HIST1H1BP16401 226 aaKnown RBP11.4□□□□□ -0.58
ZEB1-218ENST00000560196 AKIRIN2Q53H80 203 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 ZNF506Q5JVG8 444 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 C10orf91Q5T1B1 145 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 LCN15Q6UWW0 184 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 ZNF48Q96MX3 618 aaPredicted RBP11.4□□□□□ -0.58
ZEB1-218ENST00000560196 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 TREM1Q9NP99 234 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 SOX21Q9Y651 276 aaPredicted RBP11.4□□□□□ -0.58
ZEB1-218ENST00000560196 POLQO75417 2590 aa11.4□□□□□ -0.58
ZEB1-218ENST00000560196 A0A1W2PPV4 95 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 RBFOX3A6NFN3 312 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 ATP6V0E1O15342 81 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
ZEB1-218ENST00000560196 RHOBP62745 196 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 DEFB112Q30KQ8 113 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 TMEM219Q86XT9 240 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 OR5R1Q8NH85 324 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 RNF2Q99496 336 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 PRDM13Q9H4Q3 707 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 THYN1Q9P016 225 aa11.39□□□□□ -0.59
ZEB1-218ENST00000560196 ABCA12Q86UK0 2595 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 A0A1B0GV50 99 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 ZFP92A6NM28 416 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 IFNA1P01562 189 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 OR5G3P0C626 314 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 PPT1P50897 306 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 KHDC3LQ587J8 217 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 C19orf54Q5BKX5 351 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 UNQ5815/PRO19632Q6UWF5 114 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 GATAD1Q8WUU5 269 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 NARS2Q96I59 477 aaKnown RBP11.38□□□□□ -0.59
ZEB1-218ENST00000560196 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
ZEB1-218ENST00000560196 TMEM231Q9H6L2 316 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 TNFRSF19Q9NS68 423 aa11.38□□□□□ -0.59
ZEB1-218ENST00000560196 CRYBG3Q68DQ2 2970 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 LOC102723971A0A1B0GUV8 181 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 PSMB11A5LHX3 300 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 CLN5O75503 358 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 HSPB1P04792 205 aaKnown RBP11.37□□□□□ -0.59
ZEB1-218ENST00000560196 IGLC1P0CG04 106 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 IER3P46695 156 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 PSMB3P49720 205 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 FGF8P55075 233 aaPredicted RBP11.37□□□□□ -0.59
ZEB1-218ENST00000560196 PLP1P60201 277 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 RBMS3Q6XE24 437 aaKnown RBP11.37□□□□□ -0.59
ZEB1-218ENST00000560196 BCL6BQ8N143 479 aaPredicted RBP11.37□□□□□ -0.59
ZEB1-218ENST00000560196 OR1L4Q8NGR5 311 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 SEC11CQ9BY50 192 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 MRPL32Q9BYC8 188 aaKnown RBP11.37□□□□□ -0.59
ZEB1-218ENST00000560196 ZNF580Q9UK33 172 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 CARHSP1Q9Y2V2 147 aaKnown RBP11.37□□□□□ -0.59
ZEB1-218ENST00000560196 TACC2O95359 2948 aa11.37□□□□□ -0.59
ZEB1-218ENST00000560196 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 C9JQL5 133 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 BRI3O95415 125 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 IGHG2P01859 326 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 IGF1P05019 195 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 FABP1P07148 127 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 BCL2P10415 239 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 FCGR2BP31994 310 aaPredicted RBP11.36□□□□□ -0.59
ZEB1-218ENST00000560196 NPBWR1P48145 328 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 ICAM4Q14773 271 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 LY6EQ16553 131 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 Q6YL49 198 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 SLC35E3Q7Z769 313 aa11.36□□□□□ -0.59
ZEB1-218ENST00000560196 CIARTQ8N365 385 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms