RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PCOLCEQ15113 449 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 NRN1LQ496H8 165 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 RCHY1Q96PM5 261 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 FER1L5A0AVI2 2057 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 A0A0J9YW62 118 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 TCRBV4S1A1TA0A5B7 111 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 GNG5P63218 68 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 UTF1Q5T230 341 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 UBE2V1Q13404 147 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 KLF17Q5JT82 389 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 FOXD3Q9UJU5 478 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 TRBV5-7A0A0A0MS05 114 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 GAGE12BA1L429 117 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 RPL36AP83881 106 aaKnown RBP11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 ACP7Q6ZNF0 438 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 COLCA1Q6ZS62 124 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 ZPLD1Q8TCW7 415 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 RPL36ALQ969Q0 106 aaKnown RBP11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 WFDC6Q9BQY6 131 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
CSPG4P12-202ENST00000559989 NCOR1P1Q9H4R4 102 aa11.65□□□□□ -0.55
CSPG4P12-202ENST00000559989 RICTORQ6R327 1708 aa11.65□□□□□ -0.55
CSPG4P12-202ENST00000559989 POU2AF1Q16633 256 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 MMP23AO75900 390 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 EGR2P11161 476 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 FAM168AQ92567 244 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 POLR2AP24928 1970 aaKnown RBP11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 CABIN1Q9Y6J0 2220 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 EFEMP2O95967 443 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 IGHMP01871 453 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 C1orf43Q9BWL3 253 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 TSKUQ8WUA8 353 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 DLEU1O43261 78 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 RAMP1O60894 148 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 RFLNBQ8N5W9 214 aa11.64□□□□□ -0.55
CSPG4P12-202ENST00000559989 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 SRD5A1P18405 259 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 GAGE1Q13065 139 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 GAGE4Q13068 117 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 GAGE5Q13069 117 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 GAGE6Q13070 117 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 TMEM92Q6UXU6 159 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 FGF11Q92914 225 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 PRSS22Q9GZN4 317 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 PLXNB2O15031 1838 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 TRBV20-1A0A075B6N2 111 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 KNL1Q8NG31 2342 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 VCYO14598 125 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 GUSBP1Q15486 140 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 A0A1W2PRE2 83 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 CISD3P0C7P0 127 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 TIMM21Q9BVV7 248 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 YBX2Q9Y2T7 364 aaKnown RBP11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 MSGN1A6NI15 193 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 hADV29S1A0JD25 119 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 TCRAP04437 139 aa11.63□□□□□ -0.55
CSPG4P12-202ENST00000559989 BTAF1O14981 1849 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 SVILO95425 2214 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 C1QAP02745 245 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 NKAPP1Q8N9T2 125 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 PATJQ8NI35 1801 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 PSG3Q16557 428 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 LHFPL6Q9Y693 200 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 PSG1P11464 419 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 RNF125Q96EQ8 232 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 QSER1Q2KHR3 1735 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 C15orf61A6NNL5 157 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 LTBRP36941 435 aa11.62□□□□□ -0.55
CSPG4P12-202ENST00000559989 A0A087X0K7 114 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 CXCL10P02778 98 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 TMEM144Q7Z5S9 345 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 ZNF318Q5VUA4 2279 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 J3QW42 95 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 NBR2O15453 112 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 BHLHA9Q7RTU4 235 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 ZAR1Q86SH2 424 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 LINC01465Q8N7H1 131 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 DUSP15Q9H1R2 295 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 ZXDCQ2QGD7 858 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 CD5P06127 495 aa11.61□□□□□ -0.55
CSPG4P12-202ENST00000559989 DIDO1Q9BTC0 2240 aaKnown RBP11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 LIMS1P48059 325 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 THAP8Q8NA92 274 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 OR9G9P0C7N8 305 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 ZNF876PQ49A33 203 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 IGKV1D-16P01601 117 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 LSM4Q9Y4Z0 139 aaKnown RBP11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 PI4KAP42356 2102 aa11.6□□□□□ -0.55
CSPG4P12-202ENST00000559989 PRIMA1Q86XR5 153 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms