RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 DUSP18Q8NEJ0 188 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 OR52E5Q8NH55 327 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 IL22RA2Q969J5 263 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 GPR146Q96CH1 333 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 GALNT14Q96FL9 552 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 CITED4Q96RK1 184 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 RBMY1BA6NDE4 496 aaKnown RBP9.43□□□□□ -0.9
LRRC28-214ENST00000559433 RBMY1EA6NEQ0 496 aaKnown RBP9.43□□□□□ -0.9
LRRC28-214ENST00000559433 NXPH3O95157 252 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 RBMY1DP0C7P1 496 aaKnown RBP9.43□□□□□ -0.9
LRRC28-214ENST00000559433 ANXA3P12429 323 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 OPRK1P41145 380 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 NPBWR1P48145 328 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 PVRIGQ6DKI7 326 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 TMED4Q7Z7H5 227 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 ZNF414Q96IQ9 312 aa9.43□□□□□ -0.9
LRRC28-214ENST00000559433 SPAG8Q99932 426 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-214ENST00000559433 HEYLQ9NQ87 328 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-214ENST00000559433 KMT2CQ8NEZ4 4911 aaKnown RBP9.43□□□□□ -0.9
LRRC28-214ENST00000559433 CEBPZOSA8MTT3 80 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 TSPAN4O14817 238 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 SCGB2A1O75556 95 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 SULT1A3P0DMM9 295 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 SULT1A4P0DMN0 295 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 HTR2BP41595 481 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 SUPT4H1P63272 117 aaKnown RBP9.42□□□□□ -0.9
LRRC28-214ENST00000559433 SRPXP78539 464 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 BSXQ3C1V8 233 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 LINC00322Q6ZN03 302 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-214ENST00000559433 TMEM116Q8NCL8 245 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 OR10C1Q96KK4 312 aa9.42□□□□□ -0.9
LRRC28-214ENST00000559433 DNAH7Q8WXX0 4024 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 IGHV3-49A0A0A0MS15 119 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 IGHV7-4-1A0A0J9YVY3 117 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 BMI1P35226 326 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 LGI3Q8N145 548 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 SLC24A4Q8NFF2 622 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 DEDD2Q8WXF8 326 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 GINS3Q9BRX5 216 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 RHPN1-AS1Q9BWJ2 59 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 SRRQ9GZT4 340 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 FNDC4Q9H6D8 234 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-214ENST00000559433 RETNQ9HD89 108 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 CACFD1Q9UGQ2 172 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 SMPXQ9UHP9 88 aa9.41□□□□□ -0.9
LRRC28-214ENST00000559433 LOC102724200A0A096LPH7 203 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-214ENST00000559433 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 A0A0B4J2A0 478 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 RPS10-NUDT3A0A1W2PQS6 291 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 OR4C46A6NHA9 309 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 CHEK1O14757 476 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 TMEM50AO95807 157 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 VAMP1P23763 118 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 INPP1P49441 399 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 CCR6P51684 374 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 SMCO1Q147U7 214 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 MLANAQ16655 118 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 TMEM128Q5BJH2 165 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 NMSQ5H8A3 153 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 CASC10Q5T4H9 136 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 ZNF600Q6ZNG1 722 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 LYZL2Q7Z4W2 148 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 IL17DQ8TAD2 202 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 RNF2Q99496 336 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 SLC25A21Q9BQT8 299 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-214ENST00000559433 HIPK2Q9H2X6 1198 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 MRPL36Q9P0J6 103 aaKnown RBP9.4□□□□□ -0.9
LRRC28-214ENST00000559433 UBQLN2Q9UHD9 624 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 SHPKQ9UHJ6 478 aa9.4□□□□□ -0.9
LRRC28-214ENST00000559433 PUS1Q9Y606 427 aaKnown RBP eCLIP9.4□□□□□ -0.9
LRRC28-214ENST00000559433 IGHV3OR16-13A0A075B7E8 117 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 PIGBOS1A0A0B4J2F0 54 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 CLN5O75503 358 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 NPY1RP25929 384 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 CMC4P56277 68 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-214ENST00000559433 PAFAH1B2P68402 229 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 TNFRSF9Q07011 255 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 C2orf83Q53S99 150 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 TRIQKQ629K1 86 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 OR4X1Q8NH49 305 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 OR1S1Q8NH92 325 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 GGTLC1Q9BX51 225 aa9.39□□□□□ -0.91
LRRC28-214ENST00000559433 A0A1B0GU03 582 aa9.38□□□□□ -0.91
LRRC28-214ENST00000559433 DUXBA0A1W2PPF3 345 aa9.38□□□□□ -0.91
LRRC28-214ENST00000559433 TIGITQ495A1 244 aa9.38□□□□□ -0.91
LRRC28-214ENST00000559433 RNASEH2CQ8TDP1 164 aaKnown RBP9.38□□□□□ -0.91
LRRC28-214ENST00000559433 DTD1Q8TEA8 209 aa9.38□□□□□ -0.91
LRRC28-214ENST00000559433 RBKSQ9H477 322 aa9.38□□□□□ -0.91
LRRC28-214ENST00000559433 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
LRRC28-214ENST00000559433 HSPB7Q9UBY9 170 aa9.38□□□□□ -0.91
LRRC28-214ENST00000559433 IGKV3-7A0A075B6H7 116 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 SFT2D2O95562 160 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 IFNA10P01566 189 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 CD5P06127 495 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms